RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 LRP5LA4QPB2 252 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 EI24O14681 340 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 BAG2O95816 211 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 LYNP07948 512 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 MRPL3P09001 348 aaKnown RBP7.85□□□□□ -1.15
SNHG1-215ENST00000540904 SLC2A1P11166 492 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 SLC2A5P22732 501 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 HSD11B1P28845 292 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 OTX1P32242 354 aaPredicted RBP7.85□□□□□ -1.15
SNHG1-215ENST00000540904 SLC15A1P46059 708 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 GRB2P62993 217 aaKnown RBP7.85□□□□□ -1.15
SNHG1-215ENST00000540904 MRPS11P82912 194 aaKnown RBP7.85□□□□□ -1.15
SNHG1-215ENST00000540904 TNFAIP6P98066 277 aaPredicted RBP7.85□□□□□ -1.15
SNHG1-215ENST00000540904 KRTAP1-1Q07627 177 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 RIN1Q13671 783 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 GK2Q14410 553 aaPredicted RBP7.85□□□□□ -1.15
SNHG1-215ENST00000540904 TMEM249Q2WGJ8 235 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 SNAI3Q3KNW1 292 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 FAM209AQ5JX71 171 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 DRAM2Q6UX65 266 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 Q6ZR03 302 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 USP51Q70EK9 711 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 MRPL21Q7Z2W9 205 aaKnown RBP7.85□□□□□ -1.15
SNHG1-215ENST00000540904 CBR4Q8N4T8 237 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 ZNF283Q8N7M2 679 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 BHLHE23Q8NDY6 225 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 OR2Z1Q8NG97 314 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 OTOSQ8NHW6 89 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 TMEM163Q8TC26 289 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 RNF133Q8WVZ7 376 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 STMN2Q93045 179 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 ELMOD3Q96FG2 381 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 ZNF582Q96NG8 517 aaPredicted RBP7.85□□□□□ -1.15
SNHG1-215ENST00000540904 DIRC2Q96SL1 478 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 AMELYQ99218 206 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 TEAD3Q99594 435 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 KCNJ15Q99712 375 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 GABARAPL3Q9BY60 117 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 EGLN1Q9GZT9 426 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 ZNF275Q9NSD4 429 aaPredicted RBP7.85□□□□□ -1.15
SNHG1-215ENST00000540904 TREM2Q9NZC2 230 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 DNAJC27Q9NZQ0 273 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 H2AFY2Q9P0M6 372 aaPredicted RBP7.85□□□□□ -1.15
SNHG1-215ENST00000540904 ZDHHC8Q9ULC8 765 aa7.85□□□□□ -1.15
SNHG1-215ENST00000540904 C5orf63A6NC05 138 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 CCDC182A6NF36 153 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 PPIHO43447 177 aaKnown RBP7.84□□□□□ -1.15
SNHG1-215ENST00000540904 RP2O75695 350 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 ALPLP05186 524 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 ANXA2P07355 339 aaKnown RBP7.84□□□□□ -1.15
SNHG1-215ENST00000540904 H2BFMP0C1H6 154 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 SELEP16581 610 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 ACHEP22303 614 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 ANOS1P23352 680 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 TNFSF4P23510 183 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 OPRL1P41146 370 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 CRYBB2P43320 205 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 GPR6P46095 362 aaPredicted RBP7.84□□□□□ -1.15
SNHG1-215ENST00000540904 CX3CR1P49238 355 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 HCCSP53701 268 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 RAD23AP54725 363 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 TMEM33P57088 247 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 EFNB1P98172 346 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 ZNF92Q03936 586 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 CDK5R2Q13319 367 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 TRIP10Q15642 601 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 HFEQ30201 348 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 ZIK1Q3SY52 487 aaPredicted RBP7.84□□□□□ -1.15
SNHG1-215ENST00000540904 LCN1P1Q5VSP4 162 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 PGAP1Q75T13 922 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 SLC16A9Q7RTY1 509 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.84□□□□□ -1.15
SNHG1-215ENST00000540904 PQLC1Q8N2U9 271 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 OR8G5Q8NG78 346 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 OR10AD1Q8NGE0 317 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 OR2AE1Q8NHA4 323 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 CCL17Q92583 94 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 TOR3AQ9H497 397 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 NARFLQ9H6Q4 476 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 BRD7Q9NPI1 651 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 USE1Q9NZ43 259 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 LAMP5Q9UJQ1 280 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 KLHDC2Q9Y2U9 406 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 CACNG2Q9Y698 323 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 VPS13CQ709C8 3753 aa7.84□□□□□ -1.15
SNHG1-215ENST00000540904 ZNF469Q96JG9 3925 aaPredicted RBP7.83□□□□□ -1.16
SNHG1-215ENST00000540904 SLC22A31A6NKX4 558 aa7.83□□□□□ -1.16
SNHG1-215ENST00000540904 IQCF6A8MYZ5 107 aa7.83□□□□□ -1.16
SNHG1-215ENST00000540904 ANKRD65E5RJM6 399 aa7.83□□□□□ -1.16
SNHG1-215ENST00000540904 PSMD9O00233 223 aa7.83□□□□□ -1.16
SNHG1-215ENST00000540904 TBX1O43435 398 aa7.83□□□□□ -1.16
SNHG1-215ENST00000540904 LILRA1O75019 489 aa7.83□□□□□ -1.16
SNHG1-215ENST00000540904 CD55P08174 381 aa7.83□□□□□ -1.16
SNHG1-215ENST00000540904 ADH4P08319 380 aa7.83□□□□□ -1.16
SNHG1-215ENST00000540904 IGHV4-31P0DP07 118 aa7.83□□□□□ -1.16
SNHG1-215ENST00000540904 ALOX5APP20292 161 aa7.83□□□□□ -1.16
SNHG1-215ENST00000540904 ALDH3A2P51648 485 aa7.83□□□□□ -1.16
SNHG1-215ENST00000540904 CHN2P52757 468 aa7.83□□□□□ -1.16
SNHG1-215ENST00000540904 ZNF121P58317 390 aaPredicted RBP7.83□□□□□ -1.16
SNHG1-215ENST00000540904 HNRNPA0Q13151 305 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms