RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 A0A1W2PPW3 197 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 C17orf100A8MU93 164 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 M0R233 179 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 DLGAP1O14490 977 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 WNT9BO14905 357 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 VENTXO95231 258 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 IGHV1-46P01743 117 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 MRPL3P09001 348 aaKnown RBP9.68□□□□□ -0.86
TMEM258-205ENST00000540434 SLC2A1P11166 492 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 DAOP14920 347 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 SLC25A16P16260 332 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 OTX1P32242 354 aaPredicted RBP9.68□□□□□ -0.86
TMEM258-205ENST00000540434 NAA10P41227 235 aaPredicted RBP9.68□□□□□ -0.86
TMEM258-205ENST00000540434 PRKXP51817 358 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 RPS23P62266 143 aaKnown RBP9.68□□□□□ -0.86
TMEM258-205ENST00000540434 CCL8P80075 99 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 TSTQ16762 297 aaKnown RBP9.68□□□□□ -0.86
TMEM258-205ENST00000540434 ZNF718Q3SXZ3 478 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 MIDNQ504T8 468 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 AADACL4Q5VUY2 407 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 OR2T2Q6IF00 324 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 ZFP1Q6P2D0 407 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 CLEC2AQ6UVW9 174 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 PQLC1Q8N2U9 271 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 CBR4Q8N4T8 237 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 OR6N2Q8NGY6 317 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 DNAJC9Q8WXX5 260 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 SLAMF6Q96DU3 332 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 ATF6BQ99941 703 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 SOX7Q9BT81 388 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 C1QTNF5Q9BXJ0 243 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 GABARAPL3Q9BY60 117 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 HDHD2Q9H0R4 259 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 RIBC2Q9H4K1 309 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 CENPMQ9NSP4 180 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 DDX28Q9NUL7 540 aaKnown RBP9.68□□□□□ -0.86
TMEM258-205ENST00000540434 DCAF16Q9NXF7 216 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 COPS3Q9UNS2 423 aa9.68□□□□□ -0.86
TMEM258-205ENST00000540434 VSTM5A8MXK1 200 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 H0YL77 283 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 MAGEB4O15481 346 aaPredicted RBP9.67□□□□□ -0.86
TMEM258-205ENST00000540434 SPRY3O43610 288 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 EIF2B1Q14232 305 aaKnown RBP9.67□□□□□ -0.86
TMEM258-205ENST00000540434 TRIP10Q15642 601 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 CARTPTQ16568 116 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 ZSCAN26Q16670 478 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 NKPD1Q17RQ9 610 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 FAM166AQ6J272 317 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 PRSS45Q7RTY3 260 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 OR5AS1Q8N127 324 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 OR2AE1Q8NHA4 323 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 TMEM163Q8TC26 289 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 PPP1R14AQ96A00 147 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 HAVCR1Q96D42 359 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 MSI2Q96DH6 328 aaKnown RBP9.67□□□□□ -0.86
TMEM258-205ENST00000540434 RAB3IPQ96QF0 476 aaPredicted RBP9.67□□□□□ -0.86
TMEM258-205ENST00000540434 INTS14Q96SY0 518 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 RAB1BQ9H0U4 201 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 PPP1R3EQ9H7J1 279 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 ELOVL3Q9HB03 270 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 USE1Q9NZ43 259 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 TREM2Q9NZC2 230 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 ATPIF1Q9UII2 106 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 PURGQ9UJV8 347 aaKnown RBP9.67□□□□□ -0.86
TMEM258-205ENST00000540434 KCNS2Q9ULS6 477 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 N6AMT1Q9Y5N5 214 aa9.67□□□□□ -0.86
TMEM258-205ENST00000540434 IGHV4-61A0A0C4DH41 118 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 LOC100289279A0A1B0GTE1 492 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 M0R135 149 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 PSMD9O00233 223 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 CDC14BO60729 498 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 RP2O75695 350 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 BAG2O95816 211 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 LCATP04180 440 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 BMP4P12644 408 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 KITLGP21583 273 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 USF1P22415 310 aaPredicted RBP9.66□□□□□ -0.86
TMEM258-205ENST00000540434 GCH1P30793 250 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 IL2RGP31785 369 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 GZMKP49863 264 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 ALDH3A2P51648 485 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 RIN1Q13671 783 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 GK2Q14410 553 aaPredicted RBP9.66□□□□□ -0.86
TMEM258-205ENST00000540434 FBXW12Q6X9E4 464 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 ZNF786Q8N393 782 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 OTOSQ8NHW6 89 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 UBASH3BQ8TF42 649 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 RNF133Q8WVZ7 376 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 NEU4Q8WWR8 484 aaPredicted RBP9.66□□□□□ -0.86
TMEM258-205ENST00000540434 FAM168AQ92567 244 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 ZNF799Q96GE5 643 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 PLEKHA8Q96JA3 519 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 DCLRE1CQ96SD1 692 aaKnown RBP9.66□□□□□ -0.86
TMEM258-205ENST00000540434 RBM4BQ9BQ04 359 aaKnown RBP9.66□□□□□ -0.86
TMEM258-205ENST00000540434 TTTY10Q9BZA0 68 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 MS4A5Q9H3V2 200 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 TOR3AQ9H497 397 aa9.66□□□□□ -0.86
TMEM258-205ENST00000540434 IGHV3-64DA0A0J9YX35 117 aa9.65□□□□□ -0.86
TMEM258-205ENST00000540434 LRP5LA4QPB2 252 aa9.65□□□□□ -0.86
TMEM258-205ENST00000540434 MLNRO43193 412 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms