RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 ASH2LQ9UBL3 628 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 GLS2Q9UI32 602 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 LOC400499M0QZD8 3231 aa14.88□□□□□ -0.03
COPS3-212ENST00000539941 TNRC6AQ8NDV7 1962 aaKnown RBP14.87□□□□□ -0.03
COPS3-212ENST00000539941 FAM25EA8MYX2 175 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 PNPP00491 289 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 RAF1P04049 648 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 NAT2P11245 290 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 FAM27D1Q5T7N8 215 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 CFAP77Q6ZQR2 320 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 CDH24Q86UP0 819 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 MCEMP1Q8IX19 187 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 GJC3Q8NFK1 279 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 OR10S1Q8NGN2 331 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 DERL3Q96Q80 235 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 ZNF416Q9BWM5 594 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 SLCO5A1Q9H2Y9 848 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 CAMK2AQ9UQM7 478 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 A0A1B0GTH9 108 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 ATP6V1G2-DDX39BF2Z307 99 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 MKRN2OSH3BPM6 223 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 RRP8O43159 456 aaKnown RBP14.87□□□□□ -0.03
COPS3-212ENST00000539941 HIST1H3AP68431 136 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 MFGE8Q08431 387 aaPredicted RBP14.87□□□□□ -0.03
COPS3-212ENST00000539941 ENDOGQ14249 297 aaKnown RBP14.87□□□□□ -0.03
COPS3-212ENST00000539941 NRN1LQ496H8 165 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 HIST2H3PS2Q5TEC6 136 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 RPUSD3Q6P087 351 aaKnown RBP14.87□□□□□ -0.03
COPS3-212ENST00000539941 ZNF704Q6ZNC4 412 aaPredicted RBP14.87□□□□□ -0.03
COPS3-212ENST00000539941 HIST2H3AQ71DI3 136 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 ACOT12Q8WYK0 555 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 KCTD12Q96CX2 325 aaKnown RBP14.87□□□□□ -0.03
COPS3-212ENST00000539941 MOB1AQ9H8S9 216 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 CRLF2Q9HC73 371 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 PLSCR2Q9NRY7 297 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 TMEM38BQ9NVV0 291 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 ELF5Q9UKW6 265 aaPredicted RBP14.87□□□□□ -0.03
COPS3-212ENST00000539941 V9GYH0 126 aa14.87□□□□□ -0.03
COPS3-212ENST00000539941 TMEM269A0A1B0GVZ9 245 aa14.86□□□□□ -0.03
COPS3-212ENST00000539941 CBX5P45973 191 aa14.86□□□□□ -0.03
COPS3-212ENST00000539941 GRB2P62993 217 aaKnown RBP14.86□□□□□ -0.03
COPS3-212ENST00000539941 S100A12P80511 92 aa14.86□□□□□ -0.03
COPS3-212ENST00000539941 RIN1Q13671 783 aa14.86□□□□□ -0.03
COPS3-212ENST00000539941 C3AR1Q16581 482 aa14.86□□□□□ -0.03
COPS3-212ENST00000539941 DDI2Q5TDH0 399 aa14.86□□□□□ -0.03
COPS3-212ENST00000539941 PLET1Q6UQ28 207 aa14.86□□□□□ -0.03
COPS3-212ENST00000539941 SIAH3Q8IW03 269 aa14.86□□□□□ -0.03
COPS3-212ENST00000539941 OR4M1Q8NGD0 313 aa14.86□□□□□ -0.03
COPS3-212ENST00000539941 UBASH3BQ8TF42 649 aa14.86□□□□□ -0.03
COPS3-212ENST00000539941 SARAFQ96BY9 339 aa14.86□□□□□ -0.03
COPS3-212ENST00000539941 GPR137Q96N19 417 aa14.86□□□□□ -0.03
COPS3-212ENST00000539941 WACQ9BTA9 647 aa14.86□□□□□ -0.03
COPS3-212ENST00000539941 GPR35Q9HC97 309 aa14.86□□□□□ -0.03
COPS3-212ENST00000539941 NOX4Q9NPH5 578 aa14.86□□□□□ -0.03
COPS3-212ENST00000539941 PNRC2Q9NPJ4 139 aaKnown RBP14.86□□□□□ -0.03
COPS3-212ENST00000539941 G6PC2Q9NQR9 355 aa14.86□□□□□ -0.03
COPS3-212ENST00000539941 OR52A1Q9UKL2 312 aa14.86□□□□□ -0.03
COPS3-212ENST00000539941 FBXL3Q9UKT7 428 aa14.86□□□□□ -0.03
COPS3-212ENST00000539941 EMC9Q9Y3B6 208 aa14.86□□□□□ -0.03
COPS3-212ENST00000539941 CMAHPQ9Y471 501 aa14.86□□□□□ -0.03
COPS3-212ENST00000539941 PHF3Q92576 2039 aaKnown RBP14.86□□□□□ -0.03
COPS3-212ENST00000539941 TRBV5-7A0A0A0MS05 114 aa14.85□□□□□ -0.03
COPS3-212ENST00000539941 A0A1W2PQ09 198 aa14.85□□□□□ -0.03
COPS3-212ENST00000539941 ANKRD61A6NGH8 418 aa14.85□□□□□ -0.03
COPS3-212ENST00000539941 SLC22A20A6NK97 555 aa14.85□□□□□ -0.03
COPS3-212ENST00000539941 K7ENP7 123 aa14.85□□□□□ -0.03
COPS3-212ENST00000539941 TOR1AO14656 332 aa14.85□□□□□ -0.03
COPS3-212ENST00000539941 PDCD5O14737 125 aa14.85□□□□□ -0.03
COPS3-212ENST00000539941 TMEM127O75204 238 aa14.85□□□□□ -0.03
COPS3-212ENST00000539941 ISG15P05161 165 aa14.85□□□□□ -0.03
COPS3-212ENST00000539941 CST2P09228 141 aa14.85□□□□□ -0.03
COPS3-212ENST00000539941 UBCP0CG48 685 aaKnown RBP14.85□□□□□ -0.03
COPS3-212ENST00000539941 RAB3BP20337 219 aa14.85□□□□□ -0.03
COPS3-212ENST00000539941 PTBP1P26599 531 aaKnown RBP eCLIP14.85□□□□□ -0.03
COPS3-212ENST00000539941 PSMA6P60900 246 aaKnown RBP14.85□□□□□ -0.03
COPS3-212ENST00000539941 TAF13Q15543 124 aa14.85□□□□□ -0.03
COPS3-212ENST00000539941 MZT2AQ6P582 158 aa14.85□□□□□ -0.03
COPS3-212ENST00000539941 INO80CQ6PI98 192 aaPredicted RBP14.85□□□□□ -0.03
COPS3-212ENST00000539941 TUSC5Q8IXB3 177 aa14.85□□□□□ -0.03
COPS3-212ENST00000539941 ALKBH3Q96Q83 286 aaPredicted RBP14.85□□□□□ -0.03
COPS3-212ENST00000539941 ATF6BQ99941 703 aa14.85□□□□□ -0.03
COPS3-212ENST00000539941 GTF2A1LQ9UNN4 478 aa14.85□□□□□ -0.03
COPS3-212ENST00000539941 HSPB11Q9Y547 144 aa14.85□□□□□ -0.03
COPS3-212ENST00000539941 ACOD1A6NK06 481 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 RPL36A-HNRNPH2H7BZ11 118 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 RER1O15258 196 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 PIN1P1O15428 100 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 RGS5O15539 181 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 SRMP19623 302 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 ACHEP22303 614 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 CTSSP25774 331 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 HSD11B1P28845 292 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 CAV3P56539 151 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 BCL2L15Q5TBC7 163 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 TMEM244Q5VVB8 128 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 ADGRE4PQ86SQ3 457 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 ZNF837Q96EG3 531 aaPredicted RBP14.84□□□□□ -0.03
COPS3-212ENST00000539941 FOXB1Q99853 325 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 SLITRK2Q9H156 845 aa14.84□□□□□ -0.03
COPS3-212ENST00000539941 ZCCHC4Q9H5U6 513 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms