RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 UQCR10Q9UDW1 63 aa5.52□□□□□ -1.53
SNHG1-211ENST00000539921 KCNK6Q9Y257 313 aa5.52□□□□□ -1.53
SNHG1-211ENST00000539921 RBM7Q9Y580 266 aaKnown RBP5.52□□□□□ -1.53
SNHG1-211ENST00000539921 HS3ST3B1Q9Y662 390 aa5.52□□□□□ -1.53
SNHG1-211ENST00000539921 SIRT4Q9Y6E7 314 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-211ENST00000539921 IGKV6-21A0A0C4DH24 114 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 IGHV1-69-2A0A0G2JMI3 117 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 A0A1B0GVC2 190 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 A0A1W2PQ45 241 aaPredicted RBP5.51□□□□□ -1.53
SNHG1-211ENST00000539921 A0A1W2PQY0 241 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 TMEM150BA6NC51 233 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 YJEFN3A6XGL0 299 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 VSTM5A8MXK1 200 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 LOC730098B7Z3J9 87 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 FAM72CH0Y354 149 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 TRAPPC2LH3BP13 241 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 AGRPO00253 132 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 CXCL11O14625 94 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 SLC16A5O15375 505 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 TAPBPO15533 448 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 KLF4O43474 513 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 B4GALT3O60512 393 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 YPEL1O60688 119 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 SCGNO76038 276 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 WNT11O96014 354 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 PDYNP01213 254 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 C1QCP02747 245 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 OPN1SWP03999 348 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 EDN1P05305 212 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 OR4A8P0C604 315 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 OR5G3P0C626 314 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 SMIM17P0DL12 118 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 HOXB2P14652 356 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 TNFSF4P23510 183 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 AQP1P29972 269 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 CEBPDP49716 269 aaPredicted RBP5.51□□□□□ -1.53
SNHG1-211ENST00000539921 BLKP51451 505 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 LCN2P80188 198 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 ZP2Q05996 745 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 ACSM2AQ08AH3 577 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 IL15RAQ13261 267 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 CRMP1Q14194 572 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 GGTLC2Q14390 218 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 INSL4Q14641 139 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 SLC17A1Q14916 467 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 ELOCQ15369 112 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 FAM189A2Q15884 450 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 ZXDCQ2QGD7 858 aaPredicted RBP5.51□□□□□ -1.53
SNHG1-211ENST00000539921 ACSF3Q4G176 576 aaPredicted RBP5.51□□□□□ -1.53
SNHG1-211ENST00000539921 MIDNQ504T8 468 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 TRMT12Q53H54 448 aaKnown RBP5.51□□□□□ -1.53
SNHG1-211ENST00000539921 RNASE12Q5GAN4 147 aaKnown RBP5.51□□□□□ -1.53
SNHG1-211ENST00000539921 ZNF506Q5JVG8 444 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 FAM72AQ5TYM5 149 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 C1orf189Q5VU69 101 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 SDHAF4Q5VUM1 108 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 LYPLAL1Q5VWZ2 237 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 FAM219BQ5XKK7 198 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 ACSM2BQ68CK6 577 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 FAM72DQ6L9T8 149 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 PRR27Q6MZM9 219 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 RPUSD3Q6P087 351 aaKnown RBP5.51□□□□□ -1.53
SNHG1-211ENST00000539921 TTLL10Q6ZVT0 673 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 FCRLAQ7L513 359 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 BCDIN3DQ7Z5W3 292 aaKnown RBP5.51□□□□□ -1.53
SNHG1-211ENST00000539921 FAM72BQ86X60 149 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 IZUMO1Q8IYV9 350 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 DND1Q8IYX4 353 aaKnown RBP5.51□□□□□ -1.53
SNHG1-211ENST00000539921 TMEM156Q8N614 296 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 IQCF1Q8N6M8 205 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 SIRT6Q8N6T7 355 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 KLHDC1Q8N7A1 406 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 OR5L1Q8NGL2 311 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 OR4X1Q8NH49 305 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 ABHD3Q8WU67 409 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 AQP3Q92482 292 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 SNX22Q96L94 193 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 LRRC3BQ96PB8 259 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 SCGB3A2Q96PL1 93 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 YPEL2Q96QA6 119 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 OR2V2Q96R30 315 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 GINS3Q9BRX5 216 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 FNDC11Q9BVV2 318 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 EIF5A2Q9GZV4 153 aaKnown RBP5.51□□□□□ -1.53
SNHG1-211ENST00000539921 SPATC1LQ9H0A9 340 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 CDT1Q9H211 546 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 MOB1AQ9H8S9 216 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 BCL2L10Q9HD36 194 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 NEUROD4Q9HD90 331 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 PNO1Q9NRX1 252 aaKnown RBP5.51□□□□□ -1.53
SNHG1-211ENST00000539921 VPS29Q9UBQ0 182 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 OR5V1Q9UGF6 321 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 GPR34Q9UPC5 381 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 SCML2Q9UQR0 700 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 SLC22A13Q9Y226 551 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 FAM50BQ9Y247 325 aa5.51□□□□□ -1.53
SNHG1-211ENST00000539921 MRPL42Q9Y6G3 142 aaKnown RBP5.51□□□□□ -1.53
SNHG1-211ENST00000539921 SBF1O95248 1867 aa5.5□□□□□ -1.53
SNHG1-211ENST00000539921 A0A1B0GU03 582 aa5.5□□□□□ -1.53
SNHG1-211ENST00000539921 A6NIN4 97 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms