RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 CEACAM4O75871 244 aa19.69■□□□□ 0.74
HOMER3-204ENST00000539827 ZNF32P17041 273 aa19.69■□□□□ 0.74
HOMER3-204ENST00000539827 NR4A2P43354 598 aa19.69■□□□□ 0.74
HOMER3-204ENST00000539827 PITPNAQ00169 270 aa19.69■□□□□ 0.74
HOMER3-204ENST00000539827 ZNF774Q6NX45 483 aa19.69■□□□□ 0.74
HOMER3-204ENST00000539827 FGFBP3Q8TAT2 258 aa19.69■□□□□ 0.74
HOMER3-204ENST00000539827 ABCG5Q9H222 651 aa19.69■□□□□ 0.74
HOMER3-204ENST00000539827 SGCEO43556 437 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 WISP2O76076 250 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 TMIGD3P0DMS9 266 aaPredicted RBP19.68■□□□□ 0.74
HOMER3-204ENST00000539827 ZNF24P17028 368 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 DGCR2P98153 550 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 RSPO4Q2I0M5 234 aaPredicted RBP19.68■□□□□ 0.74
HOMER3-204ENST00000539827 C9orf135Q5VTT2 229 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 MTFR2Q6P444 385 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 BAIAP2L2Q6UXY1 529 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 ZNF813Q6ZN06 617 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 SKA3Q8IX90 412 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 AKR7LQ8NHP1 331 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 TRIM63Q969Q1 353 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 S100A16Q96FQ6 103 aaKnown RBP19.68■□□□□ 0.74
HOMER3-204ENST00000539827 LINC00470Q9BZP3 86 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 BCO1Q9HAY6 547 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 ZNF724A8MTY0 619 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 YES1P07947 543 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 CPN1P15169 458 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 ABOP16442 354 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 ZNF20P17024 532 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 MAP2K3P46734 347 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 POU3F4P49335 361 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 FOXC1Q12948 553 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 RAB35Q15286 201 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 C2orf76Q3KRA6 126 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 FAM166AQ6J272 317 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 SLC16A14Q7RTX9 510 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 NUFIP2Q7Z417 695 aaKnown RBP19.68■□□□□ 0.74
HOMER3-204ENST00000539827 JAGN1Q8N5M9 183 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 SLC25A28Q96A46 364 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 FAM3DQ96BQ1 224 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 MMP28Q9H239 520 aa19.68■□□□□ 0.74
HOMER3-204ENST00000539827 MEGF11A6BM72 1044 aa19.67■□□□□ 0.74
HOMER3-204ENST00000539827 M0R135 149 aa19.67■□□□□ 0.74
HOMER3-204ENST00000539827 ZNHIT1O43257 154 aa19.67■□□□□ 0.74
HOMER3-204ENST00000539827 TGM6O95932 706 aa19.67■□□□□ 0.74
HOMER3-204ENST00000539827 CD3GP09693 182 aa19.67■□□□□ 0.74
HOMER3-204ENST00000539827 CFPP27918 469 aa19.67■□□□□ 0.74
HOMER3-204ENST00000539827 DDOSTP39656 456 aa19.67■□□□□ 0.74
HOMER3-204ENST00000539827 EFNB2P52799 333 aa19.67■□□□□ 0.74
HOMER3-204ENST00000539827 RNPS1Q15287 305 aaKnown RBP19.67■□□□□ 0.74
HOMER3-204ENST00000539827 CARTPTQ16568 116 aa19.67■□□□□ 0.74
HOMER3-204ENST00000539827 GLYATL3Q5SZD4 288 aa19.67■□□□□ 0.74
HOMER3-204ENST00000539827 OR1M1Q8NGA1 313 aa19.67■□□□□ 0.74
HOMER3-204ENST00000539827 RAB40AQ8WXH6 277 aa19.67■□□□□ 0.74
HOMER3-204ENST00000539827 SPTSSAQ969W0 71 aa19.67■□□□□ 0.74
HOMER3-204ENST00000539827 HAVCR1Q96D42 359 aa19.67■□□□□ 0.74
HOMER3-204ENST00000539827 ZNF799Q96GE5 643 aa19.67■□□□□ 0.74
HOMER3-204ENST00000539827 RNF122Q9H9V4 155 aa19.67■□□□□ 0.74
HOMER3-204ENST00000539827 LYRM1O43325 122 aa19.66■□□□□ 0.74
HOMER3-204ENST00000539827 SYNGR3O43761 229 aa19.66■□□□□ 0.74
HOMER3-204ENST00000539827 HTR2CP28335 458 aa19.66■□□□□ 0.74
HOMER3-204ENST00000539827 MMP15P51511 669 aa19.66■□□□□ 0.74
HOMER3-204ENST00000539827 FOXG1P55316 489 aaPredicted RBP19.66■□□□□ 0.74
HOMER3-204ENST00000539827 ARF1P84077 181 aaKnown RBP19.66■□□□□ 0.74
HOMER3-204ENST00000539827 SCRN3Q0VDG4 424 aa19.66■□□□□ 0.74
HOMER3-204ENST00000539827 OR13C9Q8NGT0 318 aa19.66■□□□□ 0.74
HOMER3-204ENST00000539827 LYZL4Q96KX0 146 aa19.66■□□□□ 0.74
HOMER3-204ENST00000539827 TNRC6AQ8NDV7 1962 aaKnown RBP19.66■□□□□ 0.74
HOMER3-204ENST00000539827 CDK2P24941 298 aa19.66■□□□□ 0.74
HOMER3-204ENST00000539827 BDKRB2P30411 391 aa19.66■□□□□ 0.74
HOMER3-204ENST00000539827 OTX1P32242 354 aaPredicted RBP19.66■□□□□ 0.74
HOMER3-204ENST00000539827 KIR2DL3P43628 341 aa19.66■□□□□ 0.74
HOMER3-204ENST00000539827 PSG4Q00888 419 aa19.66■□□□□ 0.74
HOMER3-204ENST00000539827 NHLH1Q02575 133 aa19.66■□□□□ 0.74
HOMER3-204ENST00000539827 SFRP5Q5T4F7 317 aa19.66■□□□□ 0.74
HOMER3-204ENST00000539827 DOK3Q7L591 496 aa19.66■□□□□ 0.74
HOMER3-204ENST00000539827 GLCCI1Q86VQ1 547 aa19.66■□□□□ 0.74
HOMER3-204ENST00000539827 OR1F12Q8NHA8 337 aa19.66■□□□□ 0.74
HOMER3-204ENST00000539827 GCDHQ92947 438 aaPredicted RBP19.66■□□□□ 0.74
HOMER3-204ENST00000539827 YIPF5Q969M3 257 aa19.66■□□□□ 0.74
HOMER3-204ENST00000539827 SLC17A5Q9NRA2 495 aa19.66■□□□□ 0.74
HOMER3-204ENST00000539827 CELSR3Q9NYQ7 3312 aa19.65■□□□□ 0.74
HOMER3-204ENST00000539827 PTPRZ1P23471 2315 aaPredicted RBP19.65■□□□□ 0.74
HOMER3-204ENST00000539827 CD37P11049 281 aa19.65■□□□□ 0.74
HOMER3-204ENST00000539827 CCL1P22362 96 aa19.65■□□□□ 0.74
HOMER3-204ENST00000539827 SRP9P49458 86 aaKnown RBP19.65■□□□□ 0.74
HOMER3-204ENST00000539827 MZT2BQ6NZ67 158 aa19.65■□□□□ 0.74
HOMER3-204ENST00000539827 OR5D14Q8NGL3 314 aa19.65■□□□□ 0.74
HOMER3-204ENST00000539827 ENKURQ8TC29 256 aa19.65■□□□□ 0.74
HOMER3-204ENST00000539827 APH1AQ96BI3 265 aa19.65■□□□□ 0.74
HOMER3-204ENST00000539827 WNT5BQ9H1J7 359 aa19.65■□□□□ 0.74
HOMER3-204ENST00000539827 UPB1Q9UBR1 384 aa19.65■□□□□ 0.74
HOMER3-204ENST00000539827 TIMM10BQ9Y5J6 103 aa19.65■□□□□ 0.74
HOMER3-204ENST00000539827 LOC100289279A0A1B0GTE1 492 aa19.64■□□□□ 0.74
HOMER3-204ENST00000539827 TMEM272A0A1B0GTI8 110 aa19.64■□□□□ 0.74
HOMER3-204ENST00000539827 IGHG3P01860 377 aa19.64■□□□□ 0.74
HOMER3-204ENST00000539827 CRYGSP22914 178 aa19.64■□□□□ 0.74
HOMER3-204ENST00000539827 SCAND1P57086 179 aa19.64■□□□□ 0.74
HOMER3-204ENST00000539827 TMEM69Q5SWH9 247 aa19.64■□□□□ 0.74
HOMER3-204ENST00000539827 ZNF100Q8IYN0 542 aa19.64■□□□□ 0.74
HOMER3-204ENST00000539827 OR52N4Q8NGI2 321 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms