RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 IGHV1-18A0A0C4DH31 117 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 A0A1W2PQL4 384 aaPredicted RBP13.39□□□□□ -0.27
DDB1-216ENST00000539739 OR6C6A6NF89 314 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 PTGES3LE9PB15 166 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 CLPXO76031 633 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 CELA3BP08861 270 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 COX6B1P14854 86 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 GDI2P50395 445 aaKnown RBP13.39□□□□□ -0.27
DDB1-216ENST00000539739 ZNF322Q6U7Q0 402 aaPredicted RBP13.39□□□□□ -0.27
DDB1-216ENST00000539739 SEZ6L2Q6UXD5 910 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.39□□□□□ -0.27
DDB1-216ENST00000539739 RNF133Q8WVZ7 376 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 IPCEF1Q8WWN9 437 aaPredicted RBP13.39□□□□□ -0.27
DDB1-216ENST00000539739 MYDGFQ969H8 173 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 TMEM80Q96HE8 168 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 PSMG3-AS1Q96PY0 264 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 YTHDF1Q9BYJ9 559 aaKnown RBP13.39□□□□□ -0.27
DDB1-216ENST00000539739 NEK6Q9HC98 313 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 PCDHGB5Q9Y5G0 923 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 TENM4Q6N022 2769 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 J3QRE1 110 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 CRYAAP02489 173 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 H2BFMP0C1H6 154 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 CCNOP22674 350 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 CD40P25942 277 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 GRB2P62993 217 aaKnown RBP13.39□□□□□ -0.27
DDB1-216ENST00000539739 EGR3Q06889 387 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 ST3GAL4Q11206 333 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 DEGS2Q6QHC5 323 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 AHSA2Q719I0 299 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 SPATC1Q76KD6 591 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 KRT77Q7Z794 578 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 SPTSSAQ969W0 71 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 PLPPR2Q96GM1 343 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 CDH20Q9HBT6 801 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 PNRC2Q9NPJ4 139 aaKnown RBP13.39□□□□□ -0.27
DDB1-216ENST00000539739 DDX28Q9NUL7 540 aaKnown RBP13.39□□□□□ -0.27
DDB1-216ENST00000539739 IKZF2Q9UKS7 526 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 DIMT1Q9UNQ2 313 aaKnown RBP13.39□□□□□ -0.27
DDB1-216ENST00000539739 KLHDC2Q9Y2U9 406 aa13.39□□□□□ -0.27
DDB1-216ENST00000539739 ICE1Q9Y2F5 2266 aa13.38□□□□□ -0.27
DDB1-216ENST00000539739 C5orf49A4QMS7 147 aa13.38□□□□□ -0.27
DDB1-216ENST00000539739 GOSR1O95249 250 aa13.38□□□□□ -0.27
DDB1-216ENST00000539739 IGHA1P01876 353 aa13.38□□□□□ -0.27
DDB1-216ENST00000539739 MYL12AP19105 171 aa13.38□□□□□ -0.27
DDB1-216ENST00000539739 CRHBPP24387 322 aa13.38□□□□□ -0.27
DDB1-216ENST00000539739 HSD11B1P28845 292 aa13.38□□□□□ -0.27
DDB1-216ENST00000539739 ETV1P50549 477 aa13.38□□□□□ -0.27
DDB1-216ENST00000539739 BSPH1Q075Z2 132 aa13.38□□□□□ -0.27
DDB1-216ENST00000539739 NCMAPQ5T1S8 102 aa13.38□□□□□ -0.27
DDB1-216ENST00000539739 ARL9Q6T311 187 aa13.38□□□□□ -0.27
DDB1-216ENST00000539739 ZNF679Q8IYX0 411 aa13.38□□□□□ -0.27
DDB1-216ENST00000539739 OR10S1Q8NGN2 331 aa13.38□□□□□ -0.27
DDB1-216ENST00000539739 SNX33Q8WV41 574 aa13.38□□□□□ -0.27
DDB1-216ENST00000539739 POM121L2Q96KW2 1035 aa13.38□□□□□ -0.27
DDB1-216ENST00000539739 AMELYQ99218 206 aa13.38□□□□□ -0.27
DDB1-216ENST00000539739 NIPAL2Q9H841 368 aa13.38□□□□□ -0.27
DDB1-216ENST00000539739 EXOSC1Q9Y3B2 195 aaKnown RBP13.38□□□□□ -0.27
DDB1-216ENST00000539739 COL12A1Q99715 3063 aa13.38□□□□□ -0.27
DDB1-216ENST00000539739 GCN1Q92616 2671 aaKnown RBP13.37□□□□□ -0.27
DDB1-216ENST00000539739 LOC100509620A0A075B734 347 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.37□□□□□ -0.27
DDB1-216ENST00000539739 DPRXA6NFQ7 191 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 F5H5K5 113 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 H3BMQ9 156 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 NDUFA2O43678 99 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 APOC1P02654 83 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 KRT8P05787 483 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 CD3EP07766 207 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 EEF1B2P24534 225 aaKnown RBP13.37□□□□□ -0.27
DDB1-216ENST00000539739 OPRL1P41146 370 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 GALK2Q01415 458 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 NAAAQ02083 359 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 ROM1Q03395 351 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 GALEQ14376 348 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 DAZAP2Q15038 168 aaPredicted RBP13.37□□□□□ -0.27
DDB1-216ENST00000539739 LRRN1Q6UXK5 716 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 PLEKHG7Q6ZR37 379 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 MYPOPQ86VE0 399 aaPredicted RBP13.37□□□□□ -0.27
DDB1-216ENST00000539739 LHFPL5Q8TAF8 219 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 PIK3IP1Q96FE7 263 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 RADILQ96JH8 1075 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 COG8Q96MW5 612 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 OR8B4Q96RC9 309 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 DCLRE1CQ96SD1 692 aaKnown RBP13.37□□□□□ -0.27
DDB1-216ENST00000539739 KCNJ15Q99712 375 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 BCL7BQ9BQE9 202 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 RHNO1Q9BSD3 238 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 JAM3Q9BX67 310 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 TTTY10Q9BZA0 68 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 IFT22Q9H7X7 185 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 EIF3KQ9UBQ5 218 aaKnown RBP13.37□□□□□ -0.27
DDB1-216ENST00000539739 DOPEY2Q9Y3R5 2298 aa13.37□□□□□ -0.27
DDB1-216ENST00000539739 USP9YO00507 2555 aaPredicted RBP13.36□□□□□ -0.27
DDB1-216ENST00000539739 IGHV2OR16-5A0A0B4J2B6 119 aa13.36□□□□□ -0.27
DDB1-216ENST00000539739 ABCD4O14678 606 aa13.36□□□□□ -0.27
DDB1-216ENST00000539739 CCL2P13500 99 aa13.36□□□□□ -0.27
DDB1-216ENST00000539739 RIDAP52758 137 aaKnown RBP13.36□□□□□ -0.27
DDB1-216ENST00000539739 ACTA2P62736 377 aa13.36□□□□□ -0.27
DDB1-216ENST00000539739 ACTG2P63267 376 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms