RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 TMPRSS13Q9BYE2 586 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 POTEKPQ9BYX7 375 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 CYB5R1Q9UHQ9 305 aa12.48□□□□□ -0.41
UBE3B-210ENST00000539599 EEF1E1-BLOC1S5C9J1V9 151 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 SOCS1O15524 211 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 CD34P28906 385 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 DAP3P51398 398 aaKnown RBP12.47□□□□□ -0.41
UBE3B-210ENST00000539599 BAMBIQ13145 260 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 ZNF454Q8N9F8 522 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 OR1M1Q8NGA1 313 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 MFSD8Q8NHS3 518 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 OR14I1A6ND48 311 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 OR5H14A6NHG9 310 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 OR6C65A6NJZ3 312 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 HSPB2A8KAH6 182 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 SSX5O60225 188 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 MPGP29372 298 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 AFF3P51826 1226 aaKnown RBP12.47□□□□□ -0.41
UBE3B-210ENST00000539599 LUMP51884 338 aaPredicted RBP12.47□□□□□ -0.41
UBE3B-210ENST00000539599 SCAND1P57086 179 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 CLRN1P58418 232 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 CCL7P80098 99 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 IKZF1Q13422 519 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 HSPB2Q16082 182 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 RHBDD2Q6NTF9 364 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 ATRAIDQ6UW56 229 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 BHLHE23Q8NDY6 225 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 CADM4Q8NFZ8 388 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 ZNF768Q9H5H4 540 aaKnown RBP12.47□□□□□ -0.41
UBE3B-210ENST00000539599 OR6C76A6NM76 312 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 B8ZZF3 427 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 MPIG6BO95866 241 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 CFPP27918 469 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 ZNF41P51814 821 aaPredicted RBP12.47□□□□□ -0.41
UBE3B-210ENST00000539599 EMP2P54851 167 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 PLPPR5Q32ZL2 321 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 RNASE10Q5GAN6 216 aaKnown RBP12.47□□□□□ -0.41
UBE3B-210ENST00000539599 TMEM81Q6P7N7 255 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 TDHQ8IZJ6 230 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 OR10K1Q8NGX5 313 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 AQP3Q92482 292 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 DDIT4LQ96D03 193 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 C1orf198Q9H425 327 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 OCIAD1Q9NX40 245 aa12.47□□□□□ -0.41
UBE3B-210ENST00000539599 A0A1B0GTI1 187 aa12.46□□□□□ -0.41
UBE3B-210ENST00000539599 H3BUI4 141 aa12.46□□□□□ -0.41
UBE3B-210ENST00000539599 TPD52L2O43399 206 aaKnown RBP12.46□□□□□ -0.41
UBE3B-210ENST00000539599 RAD51DO75771 328 aa12.46□□□□□ -0.41
UBE3B-210ENST00000539599 ZNF121P58317 390 aaPredicted RBP12.46□□□□□ -0.41
UBE3B-210ENST00000539599 TMEM176BQ3YBM2 270 aaPredicted RBP12.46□□□□□ -0.41
UBE3B-210ENST00000539599 C1orf100Q5SVJ3 147 aa12.46□□□□□ -0.41
UBE3B-210ENST00000539599 TMEM244Q5VVB8 128 aa12.46□□□□□ -0.41
UBE3B-210ENST00000539599 ELP2Q6IA86 826 aa12.46□□□□□ -0.41
UBE3B-210ENST00000539599 KLHL24Q6TFL4 600 aa12.46□□□□□ -0.41
UBE3B-210ENST00000539599 ZNF704Q6ZNC4 412 aaPredicted RBP12.46□□□□□ -0.41
UBE3B-210ENST00000539599 OR8B12Q8NGG6 310 aa12.46□□□□□ -0.41
UBE3B-210ENST00000539599 MARCH1Q8TCQ1 289 aa12.46□□□□□ -0.41
UBE3B-210ENST00000539599 SCARB1Q8WTV0 552 aa12.46□□□□□ -0.41
UBE3B-210ENST00000539599 PPP1R1CQ8WVI7 109 aa12.46□□□□□ -0.41
UBE3B-210ENST00000539599 ZBTB8AQ96BR9 441 aa12.46□□□□□ -0.41
UBE3B-210ENST00000539599 CRB3Q9BUF7 120 aa12.46□□□□□ -0.41
UBE3B-210ENST00000539599 GPR84Q9NQS5 396 aa12.46□□□□□ -0.41
UBE3B-210ENST00000539599 KIF25Q9UIL4 384 aa12.46□□□□□ -0.41
UBE3B-210ENST00000539599 NUP50Q9UKX7 468 aa12.46□□□□□ -0.41
UBE3B-210ENST00000539599 A6NIZ1 184 aa12.46□□□□□ -0.42
UBE3B-210ENST00000539599 HMSDA8MTL9 139 aa12.46□□□□□ -0.42
UBE3B-210ENST00000539599 TMEM127O75204 238 aa12.46□□□□□ -0.42
UBE3B-210ENST00000539599 PMS2P2O95744 297 aa12.46□□□□□ -0.42
UBE3B-210ENST00000539599 ATF4P18848 351 aaPredicted RBP12.46□□□□□ -0.42
UBE3B-210ENST00000539599 HSD11B1P28845 292 aa12.46□□□□□ -0.42
UBE3B-210ENST00000539599 APOBEC1P41238 236 aaKnown RBP12.46□□□□□ -0.42
UBE3B-210ENST00000539599 RAP1BP61224 184 aa12.46□□□□□ -0.42
UBE3B-210ENST00000539599 RAP1AP62834 184 aa12.46□□□□□ -0.42
UBE3B-210ENST00000539599 PCK2Q16822 640 aa12.46□□□□□ -0.42
UBE3B-210ENST00000539599 PLAC9Q5JTB6 97 aa12.46□□□□□ -0.42
UBE3B-210ENST00000539599 GLIPR1L1Q6UWM5 242 aa12.46□□□□□ -0.42
UBE3B-210ENST00000539599 UNQ6126/PRO20091Q6UXV3 157 aa12.46□□□□□ -0.42
UBE3B-210ENST00000539599 FAM57BQ71RH2 274 aa12.46□□□□□ -0.42
UBE3B-210ENST00000539599 PRSS42Q7Z5A4 293 aa12.46□□□□□ -0.42
UBE3B-210ENST00000539599 ST8SIA1Q92185 356 aa12.46□□□□□ -0.42
UBE3B-210ENST00000539599 UBE2ZQ9H832 354 aaPredicted RBP12.46□□□□□ -0.42
UBE3B-210ENST00000539599 SLC17A5Q9NRA2 495 aa12.46□□□□□ -0.42
UBE3B-210ENST00000539599 LOC400499M0QZD8 3231 aa12.46□□□□□ -0.42
UBE3B-210ENST00000539599 C13orf42A0A1B0GVH6 325 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 LOC390937A0A1W2PQ73 354 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 RFPL4AA6NLU0 287 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 RFPL4AL1F8VTS6 287 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 B3GALNT1O75752 331 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 STK17BO94768 372 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 ISG15P05161 165 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 ERCC1P07992 297 aaPredicted RBP12.45□□□□□ -0.42
UBE3B-210ENST00000539599 HOXD4P09016 255 aaPredicted RBP12.45□□□□□ -0.42
UBE3B-210ENST00000539599 UBCP0CG48 685 aaKnown RBP12.45□□□□□ -0.42
UBE3B-210ENST00000539599 ZNF93P35789 620 aaPredicted RBP12.45□□□□□ -0.42
UBE3B-210ENST00000539599 NUP62P37198 522 aaPredicted RBP12.45□□□□□ -0.42
UBE3B-210ENST00000539599 QRFPP83859 136 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 DNM1P34Q6PK57 102 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 C1QL2Q7Z5L3 287 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 OIT3Q8WWZ8 545 aa12.45□□□□□ -0.42
UBE3B-210ENST00000539599 MYOTQ9UBF9 498 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms