RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 ZNF879B4DU55 563 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 CEACAM4O75871 244 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 GPANK1O95872 356 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 ANXA2P07355 339 aaKnown RBP7.79□□□□□ -1.16
GGA3-202ENST00000538886 SELLP14151 372 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 CHMP24386 653 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 ADH6P28332 368 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 ZNF74Q16587 644 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 ALKBH6Q3KRA9 238 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 ACSF3Q4G176 576 aaPredicted RBP7.79□□□□□ -1.16
GGA3-202ENST00000538886 HIKESHIQ53FT3 197 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 TSPO2Q5TGU0 170 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 HIST2H2BCQ6DN03 193 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 ABHD12BQ7Z5M8 362 aaPredicted RBP7.79□□□□□ -1.16
GGA3-202ENST00000538886 ZNF283Q8N7M2 679 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 SMAP2Q8WU79 429 aaPredicted RBP7.79□□□□□ -1.16
GGA3-202ENST00000538886 SCMH1Q96GD3 660 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 OXGR1Q96P68 337 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 WDR76Q9H967 626 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 PROK2Q9HC23 129 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 NGBQ9NPG2 151 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 NUDT15Q9NV35 164 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 CLN6Q9NWW5 311 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 FZR1Q9UM11 496 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 SLC22A23A1A5C7 686 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 AQP7O14520 342 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 CDC42EP2O14613 210 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 GATCO43716 136 aaKnown RBP7.79□□□□□ -1.16
GGA3-202ENST00000538886 GRK5P34947 590 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 SELENOVP59797 346 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 CLINT1Q14677 625 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 ZNF239Q16600 458 aaKnown RBP7.79□□□□□ -1.16
GGA3-202ENST00000538886 BHLHE23Q8NDY6 225 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 MFSD8Q8NHS3 518 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 ASB5Q8WWX0 329 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 MIB2Q96AX9 1013 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 LRR1Q96L50 414 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 CXorf58Q96LI9 332 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 C7orf50Q9BRJ6 194 aaKnown RBP7.79□□□□□ -1.16
GGA3-202ENST00000538886 GINS4Q9BRT9 223 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 MEPEQ9NQ76 525 aaPredicted RBP7.79□□□□□ -1.16
GGA3-202ENST00000538886 COA3Q9Y2R0 106 aaPredicted RBP7.79□□□□□ -1.16
GGA3-202ENST00000538886 FKBP7Q9Y680 259 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 ATP23Q9Y6H3 246 aa7.79□□□□□ -1.16
GGA3-202ENST00000538886 TCRBV5S2A0A599 114 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 OR14I1A6ND48 311 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 C16orf97H3BN30 126 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 FFAR1O14842 300 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 GATBO75879 557 aaKnown RBP7.78□□□□□ -1.16
GGA3-202ENST00000538886 CFDP00746 253 aaPredicted RBP7.78□□□□□ -1.16
GGA3-202ENST00000538886 HPNP05981 417 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 CD14P08571 375 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 CSF3P09919 207 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 SLC2A1P11166 492 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 LHX2P50458 406 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 PRSS12P56730 875 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 ARF1P84077 181 aaKnown RBP7.78□□□□□ -1.16
GGA3-202ENST00000538886 BAMBIQ13145 260 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 CRMP1Q14194 572 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 MEP1BQ16820 701 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 GPR139Q6DWJ6 353 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 ATRAIDQ6UW56 229 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 LRRN1Q6UXK5 716 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 SLC46A3Q7Z3Q1 461 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 SFT2D1Q8WV19 159 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 PIK3IP1Q96FE7 263 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 ARHGDIGQ99819 225 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 SLCO5A1Q9H2Y9 848 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 ELL3Q9HB65 397 aaPredicted RBP7.78□□□□□ -1.16
GGA3-202ENST00000538886 CBY1Q9Y3M2 126 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 FREM1Q5H8C1 2179 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 PHF3Q92576 2039 aaKnown RBP7.78□□□□□ -1.16
GGA3-202ENST00000538886 EFNA2O43921 213 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 MRPS14O60783 128 aaKnown RBP7.78□□□□□ -1.16
GGA3-202ENST00000538886 MT-ATP6P00846 226 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 PTHP01270 115 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 LCATP04180 440 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 CTSSP25774 331 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 FKBP2P26885 142 aaKnown RBP7.78□□□□□ -1.16
GGA3-202ENST00000538886 CHRNB4P30926 498 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 FABP6P51161 128 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 CRISP1P54107 249 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 CDH11P55287 796 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 SNRPEP62304 92 aaKnown RBP7.78□□□□□ -1.16
GGA3-202ENST00000538886 MAD2L1BPQ15013 274 aaPredicted RBP7.78□□□□□ -1.16
GGA3-202ENST00000538886 SPATA46Q5T0L3 261 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 ANKRD16Q6P6B7 361 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 KRT77Q7Z794 578 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 ST6GALNAC3Q8NDV1 305 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 OR5T2Q8NGG2 359 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 FBXO17Q96EF6 278 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 ZNF251Q9BRH9 671 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 PAPOLGQ9BWT3 736 aaKnown RBP7.78□□□□□ -1.16
GGA3-202ENST00000538886 DUSP21Q9H596 190 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 EXOSC3Q9NQT5 275 aaKnown RBP7.78□□□□□ -1.16
GGA3-202ENST00000538886 LAMP5Q9UJQ1 280 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 RASD1Q9Y272 281 aa7.78□□□□□ -1.16
GGA3-202ENST00000538886 IQCMA0A1B0GVH7 501 aa7.77□□□□□ -1.16
GGA3-202ENST00000538886 A0A1W2PRQ8 180 aa7.77□□□□□ -1.16
GGA3-202ENST00000538886 NPIPB9F8W1W9 429 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms