RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 GPR85P60893 370 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 STPG2Q8N412 459 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 NUBPLQ8TB37 319 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 WDR13Q9H1Z4 485 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 KLHL13Q9P2N7 655 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 SRPK3Q9UPE1 567 aa12.73□□□□□ -0.37
USP44-203ENST00000537435 RPH3AQ9Y2J0 694 aaPredicted RBP12.73□□□□□ -0.37
USP44-203ENST00000537435 A0A1W2PNV4 684 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 D6RAR5 112 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 TSPAN4O14817 238 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 STK17BO94768 372 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 OPN1LWP04000 364 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 GIMD1P0DJR0 217 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 RAB3AP20336 220 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 LAP3P28838 519 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 HRH1P35367 487 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 MYBPHQ13203 477 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 AWAT2Q6E213 333 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 JMJD6Q6NYC1 403 aaPredicted RBP12.72□□□□□ -0.37
USP44-203ENST00000537435 WDR74Q6RFH5 385 aaPredicted RBP12.72□□□□□ -0.37
USP44-203ENST00000537435 CFAP77Q6ZQR2 320 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 RTN4RL2Q86UN3 420 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 KCNRGQ8N5I3 272 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 ZDHHC22Q8N966 263 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 OR5D14Q8NGL3 314 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 ST8SIA4Q92187 359 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 UQCC2Q9BRT2 126 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 SELENOIQ9C0D9 397 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 MS4A7Q9GZW8 240 aaPredicted RBP12.72□□□□□ -0.37
USP44-203ENST00000537435 SLC25A32Q9H2D1 315 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 TMEM185BQ9H7F4 350 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 IFT46Q9NQC8 304 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 PPP4R1LQ9P1A2 415 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 TNFSF18Q9UNG2 199 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 SLC5A6Q9Y289 635 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 IGLV3-12A0A075B6K2 115 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 TPD52L2O43399 206 aaKnown RBP12.72□□□□□ -0.37
USP44-203ENST00000537435 SLC25A4P12235 298 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 MPZP25189 248 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 ZNF41P51814 821 aaPredicted RBP12.72□□□□□ -0.37
USP44-203ENST00000537435 SMAD2Q15796 467 aaKnown RBP12.72□□□□□ -0.37
USP44-203ENST00000537435 FAM74A1Q5RGS3 127 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 ANGPTL5Q86XS5 388 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 ZBTB44Q8NCP5 570 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 PXT1Q8NFP0 134 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 OR51E1Q8TCB6 317 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 PPP1R1CQ8WVI7 109 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 MRPL13Q9BYD1 178 aaKnown RBP12.72□□□□□ -0.37
USP44-203ENST00000537435 SEC61A2Q9H9S3 476 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 FANCFQ9NPI8 374 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 PLEKHA6Q9Y2H5 1048 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 POLR1DQ9Y2S0 133 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 SDK1Q7Z5N4 2213 aa12.72□□□□□ -0.37
USP44-203ENST00000537435 KANTRA0A1W2PQU2 76 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 C9orf170A2RU37 121 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 BET1O15155 118 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 IL2RAP01589 272 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 DCNP07585 359 aaKnown RBP12.71□□□□□ -0.37
USP44-203ENST00000537435 BCKDHBP21953 392 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 ZNF93P35789 620 aaPredicted RBP12.71□□□□□ -0.37
USP44-203ENST00000537435 ATP1B3P54709 279 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 CLRN1P58418 232 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 IL13RA1P78552 427 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 ATXN7L3Q14CW9 347 aaPredicted RBP12.71□□□□□ -0.37
USP44-203ENST00000537435 ZMYND11Q15326 602 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 BEX5Q5H9J7 111 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 TMPRSS9Q7Z410 1059 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 RNF144BQ7Z419 303 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 EIF4E3Q8N5X7 224 aaKnown RBP12.71□□□□□ -0.37
USP44-203ENST00000537435 SPACA5Q96QH8 159 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 VRK1Q99986 396 aaPredicted RBP12.71□□□□□ -0.37
USP44-203ENST00000537435 RNF222A6NCQ9 220 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 FAM25EA8MYX2 175 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 MBTPS2O43462 519 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 OR2F2O95006 317 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 TIAF1O95411 115 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 ATF4P18848 351 aaPredicted RBP12.71□□□□□ -0.37
USP44-203ENST00000537435 IGFBP4P22692 258 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 AVPR2P30518 371 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 PRKXP51817 358 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 LUMP51884 338 aaPredicted RBP12.71□□□□□ -0.37
USP44-203ENST00000537435 OR2F1Q13607 317 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 ZNF345Q14585 488 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 PLPPR5Q32ZL2 321 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 NKAIN1Q4KMZ8 207 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 THEM4Q5T1C6 240 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 ZNF529Q6P280 563 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 RHOUQ7L0Q8 258 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 UEVLDQ8IX04 471 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 ZNF101Q8IZC7 436 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 OR10R2Q8NGX6 335 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 POC1BQ8TC44 478 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 CASTOR1Q8WTX7 329 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 MITD1Q8WV92 249 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 MRGPRX4Q96LA9 322 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 NICN1Q9BSH3 213 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 SOX7Q9BT81 388 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 RASL12Q9NYN1 266 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 KCNK7Q9Y2U2 307 aa12.71□□□□□ -0.37
USP44-203ENST00000537435 LHFPL6Q9Y693 200 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms