RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 KIR3DL2P43630 455 aa10.5□□□□□ -0.73
CLIP1-208ENST00000537004 CLRN1P58418 232 aa10.5□□□□□ -0.73
CLIP1-208ENST00000537004 ASAH1Q13510 395 aa10.5□□□□□ -0.73
CLIP1-208ENST00000537004 PCK2Q16822 640 aa10.5□□□□□ -0.73
CLIP1-208ENST00000537004 WDR38Q5JTN6 314 aa10.5□□□□□ -0.73
CLIP1-208ENST00000537004 OR7E24Q6IFN5 339 aa10.5□□□□□ -0.73
CLIP1-208ENST00000537004 HDDC2Q7Z4H3 204 aa10.5□□□□□ -0.73
CLIP1-208ENST00000537004 GGNQ86UU5 652 aa10.5□□□□□ -0.73
CLIP1-208ENST00000537004 DMRTC2Q8IXT2 367 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-208ENST00000537004 OR52N5Q8NH56 324 aa10.5□□□□□ -0.73
CLIP1-208ENST00000537004 FNDC9Q8TBE3 224 aa10.5□□□□□ -0.73
CLIP1-208ENST00000537004 RNF128Q8TEB7 428 aa10.5□□□□□ -0.73
CLIP1-208ENST00000537004 SLC25A44Q96H78 314 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-208ENST00000537004 C4orf45Q96LM5 186 aa10.5□□□□□ -0.73
CLIP1-208ENST00000537004 KLHL9Q9P2J3 617 aa10.5□□□□□ -0.73
CLIP1-208ENST00000537004 ZNF629Q9UEG4 869 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-208ENST00000537004 LRP12Q9Y561 859 aa10.5□□□□□ -0.73
CLIP1-208ENST00000537004 DOCK7Q96N67 2140 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 A0A0B4J203 849 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 LINC00854A0A1B0GVQ3 168 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 PDCD5O14737 125 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 ZNF254O75437 659 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 AQP8O94778 261 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 HRGP04196 525 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 PGA4P0DJD7 388 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 PGA3P0DJD8 388 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 ZNF43P17038 809 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 KLK2P20151 261 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 NPR2P20594 1047 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 CTSSP25774 331 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 TALDO1P37837 337 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 SOX2P48431 317 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 CCR9P51686 369 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 RIDAP52758 137 aaKnown RBP10.49□□□□□ -0.73
CLIP1-208ENST00000537004 CAMK2DQ13557 499 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 SF3B4Q15427 424 aaKnown RBP eCLIP10.49□□□□□ -0.73
CLIP1-208ENST00000537004 ODF4Q2M2E3 257 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 TEX30Q5JUR7 227 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 THEM4Q5T1C6 240 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 DCXRQ7Z4W1 244 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 NRARPQ7Z6K4 114 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 LUZP2Q86TE4 346 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 GLB1L2Q8IW92 636 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 RDH10Q8IZV5 341 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 NOXO1Q8NFA2 376 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 OR4M1Q8NGD0 313 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 OR10AC1Q8NH08 325 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 ST7LQ8TDW4 575 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 HPS1Q92902 700 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 WNT2BQ93097 391 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 GFI1Q99684 422 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 ABRACLQ9P1F3 81 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 ARHGAP21Q5T5U3 1957 aa10.49□□□□□ -0.73
CLIP1-208ENST00000537004 A0A0G2JMP0 313 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 A0A0X1KG70 313 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 LOC102725191A0A1B0GVB3 256 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 EIF1AYO14602 144 aaKnown RBP10.48□□□□□ -0.73
CLIP1-208ENST00000537004 PNPP00491 289 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 HLA-DQB1P01920 261 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 SNRPBP14678 240 aaKnown RBP10.48□□□□□ -0.73
CLIP1-208ENST00000537004 EIF1AXP47813 144 aaKnown RBP10.48□□□□□ -0.73
CLIP1-208ENST00000537004 H3F3AP84243 136 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 MFGE8Q08431 387 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-208ENST00000537004 CHMP1BQ7LBR1 199 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 LINC00346Q8IVM7 164 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 MEIOBQ8N635 442 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 ZNF433Q8N7K0 673 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-208ENST00000537004 OR4M2Q8NGB6 313 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 OR51A4Q8NGJ6 313 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 OR5H6Q8NGV6 325 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 OR6X1Q8NH79 312 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 GPR148Q8TDV2 347 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 UCN2Q96RP3 112 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 BRD7Q9NPI1 651 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 GTF2A1LQ9UNN4 478 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 HCFC1P51610 2035 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 SLC22A20A6NK97 555 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 H3BSH0 61 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 GPR171O14626 319 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 TNFSF13O75888 250 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 RFX2P48378 723 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 RAC1P63000 192 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 TLE4Q04727 773 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 CARD17Q5XLA6 110 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 TRIQKQ629K1 86 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 STAC2Q6ZMT1 411 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 P4HA3Q7Z4N8 544 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 SLC7A5P1Q8MH63 180 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 SLITRK2Q9H156 845 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 MOV10Q9HCE1 1003 aaKnown RBP10.48□□□□□ -0.73
CLIP1-208ENST00000537004 TCF7L1Q9HCS4 588 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 SLC22A13Q9Y226 551 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 MED12LQ86YW9 2145 aa10.48□□□□□ -0.73
CLIP1-208ENST00000537004 ABCA4P78363 2273 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 TRBV5-7A0A0A0MS05 114 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 A0A0J9YW62 118 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 ANKRD61A6NGH8 418 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 IFITM5A6NNB3 132 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 AIPO00170 330 aa10.47□□□□□ -0.73
CLIP1-208ENST00000537004 TNFSF11O14788 317 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms