RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 FFAR1O14842 300 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 AKR7A3O95154 331 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 ETHE1O95571 254 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 CD74P04233 296 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 SERPINE2P07093 398 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF728P0DKX0 622 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 MYOGP15173 224 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 CSF2RAP15509 400 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 CLN3Q13286 438 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 SERTAD2Q14140 314 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 DHCR24Q15392 516 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 MIDNQ504T8 468 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 PHF19Q5T6S3 580 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 PRAMEF9Q5VWM5 478 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF574Q6ZN55 896 aaPredicted RBP4.9□□□□□ -1.63
PTPRD-213ENST00000537002 SLC36A1Q7Z2H8 476 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 SMIM15Q7Z3B0 74 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF439Q8NDP4 499 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 TMEM104Q8NE00 496 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 OR5D14Q8NGL3 314 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 RNF128Q8TEB7 428 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 SGCZQ96LD1 299 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 PACRGQ96M98 296 aaPredicted RBP4.9□□□□□ -1.63
PTPRD-213ENST00000537002 WFIKKN1Q96NZ8 548 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 NKX3-1Q99801 234 aaPredicted RBP4.9□□□□□ -1.63
PTPRD-213ENST00000537002 CLDND1Q9NY35 253 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 NXT1Q9UKK6 140 aaKnown RBP4.9□□□□□ -1.63
PTPRD-213ENST00000537002 TMEM265A0A087WTH1 108 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 A0A1W2PPE2 198 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 ANKUB1A6NFN9 424 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 BRINP1O60477 761 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 HBE1P02100 147 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 TSFMP43897 325 aaKnown RBP4.89□□□□□ -1.63
PTPRD-213ENST00000537002 PNRC1Q12796 327 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-213ENST00000537002 ARHGAP19Q14CB8 494 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 UNQ9370/PRO34162Q6UXP9 181 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 CMTM1Q8IZ96 169 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 PRR18Q8N4B5 295 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 DEFB123Q8N688 67 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 OR4S1Q8NGB4 309 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 MARCH1Q8TCQ1 289 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 ASB17Q8WXJ9 295 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 NUDT16L1Q9BRJ7 211 aaKnown RBP4.89□□□□□ -1.63
PTPRD-213ENST00000537002 STARD5Q9NSY2 213 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 PRODH2Q9UF12 536 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 SUSD2Q9UGT4 822 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 A0A1B0GWA3 101 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 YY2O15391 372 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 GALTP07902 379 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 OR5H8P0DN80 308 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 HIST1H1TP22492 207 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-213ENST00000537002 NPBWR1P48145 328 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 RAB28P51157 221 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 CARD18P57730 90 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 HNRNPKP61978 463 aaKnown RBP eCLIP4.89□□□□□ -1.63
PTPRD-213ENST00000537002 MEP1BQ16820 701 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 FAM199XQ6PEV8 388 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-213ENST00000537002 GRASPQ7Z6J2 395 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF440Q8IYI8 595 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 FAM58AQ8N1B3 248 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 OR13C8Q8NGS7 320 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 BORCS8Q96FH0 119 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 SERINC2Q96SA4 455 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 EPHX3Q9H6B9 360 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 PLEKHA3Q9HB20 300 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 IL17BQ9UHF5 180 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 KCNG2Q9UJ96 466 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 UBR3Q6ZT12 1888 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 BTAF1O14981 1849 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 DVL1O14640 695 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 BCAT2O15382 392 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-213ENST00000537002 CD5P06127 495 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 IFI6P09912 130 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 ELLP55199 621 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-213ENST00000537002 ELAVL1Q15717 326 aaKnown RBP4.89□□□□□ -1.63
PTPRD-213ENST00000537002 TMEM255AQ5JRV8 349 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 THEM4Q5T1C6 240 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 PET117Q6UWS5 81 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 TAS1R1Q7RTX1 841 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF429Q86V71 674 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 SEMA6DQ8NFY4 1073 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 TMEM18Q96B42 140 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 RBMXL1Q96E39 390 aaKnown RBP4.89□□□□□ -1.63
PTPRD-213ENST00000537002 MMABQ96EY8 250 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-213ENST00000537002 CHST5Q9GZS9 411 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 WDR76Q9H967 626 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 PLEKHA2Q9HB19 425 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 LAMP3Q9UQV4 416 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 LOC285556D6RIA3 1793 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 J3QRE1 110 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 DUS4LO95620 317 aaKnown RBP4.89□□□□□ -1.63
PTPRD-213ENST00000537002 PNMTP11086 282 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 ALOX5APP20292 161 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 HNF1AP20823 631 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 GLO1Q04760 184 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 ZP2Q05996 745 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF266Q14584 549 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 OTPQ5XKR4 325 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 TMEM225Q6GV28 225 aa4.89□□□□□ -1.63
PTPRD-213ENST00000537002 PWWP2BQ6NUJ5 590 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms