RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 C1orf87Q8N0U7 546 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 C2orf73Q8N5S3 287 aaPredicted RBP3.34□□□□□ -1.87
MCF2-210ENST00000536274 MORN4Q8NDC4 146 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 OR51D1Q8NGF3 324 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 OR13C8Q8NGS7 320 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 ADAMTS17Q8TE56 1095 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 DOK4Q8TEW6 326 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 ASB13Q8WXK3 278 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 NKD1Q969G9 470 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 IL22RA2Q969J5 263 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 IGSF8Q969P0 613 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 ZMYND19Q96E35 227 aaPredicted RBP3.34□□□□□ -1.87
MCF2-210ENST00000536274 S100A16Q96FQ6 103 aaKnown RBP3.34□□□□□ -1.87
MCF2-210ENST00000536274 CDC6Q99741 560 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 TAF9BQ9HBM6 251 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 TRIM36Q9NQ86 728 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 KLHL28Q9NXS3 571 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 RBM7Q9Y580 266 aaKnown RBP3.34□□□□□ -1.87
MCF2-210ENST00000536274 SPAG17Q6Q759 2223 aa3.34□□□□□ -1.87
MCF2-210ENST00000536274 KIAA1549LQ6ZVL6 1849 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 IGKV6D-21A0A0A0MT36 114 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 SERTM1A2A2V5 107 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 FAM221AA4D161 298 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 BLACEA4D250 179 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 IFITM5A6NNB3 132 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 ZNF891A8MT65 544 aaPredicted RBP3.34□□□□□ -1.88
MCF2-210ENST00000536274 NUPR1O60356 82 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 HPRT1P00492 218 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 CD8AP01732 235 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 METTL15P1P0C7V9 234 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 OR5H8P0DN80 308 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 FGF5P12034 268 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 RPS2P15880 293 aaKnown RBP3.34□□□□□ -1.88
MCF2-210ENST00000536274 TYRP1P17643 537 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 HLA-GP17693 338 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 ADRA2CP18825 462 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 SRMP19623 302 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 TYMPP19971 482 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 GRNP28799 593 aaKnown RBP3.34□□□□□ -1.88
MCF2-210ENST00000536274 MC3RP41968 323 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 RPS27P42677 84 aaKnown RBP3.34□□□□□ -1.88
MCF2-210ENST00000536274 PCBP3P57721 371 aaKnown RBP3.34□□□□□ -1.88
MCF2-210ENST00000536274 FXYD6P3P58550 94 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 PRPS1P60891 318 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 RPS13P62277 151 aaKnown RBP3.34□□□□□ -1.88
MCF2-210ENST00000536274 DLK1P80370 383 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 DEFB103AP81534 67 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 TFF2Q03403 129 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 ZBTB6Q15916 424 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 AMZ1Q400G9 498 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 C9orf57Q5W0N0 161 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 FRG2Q64ET8 278 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 STEAP1BQ6NZ63 245 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 TMPRSS12Q86WS5 348 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 ANGPTL5Q86XS5 388 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 C1QL4Q86Z23 238 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 CALHM1Q8IU99 346 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 DND1Q8IYX4 353 aaKnown RBP3.34□□□□□ -1.88
MCF2-210ENST00000536274 GVQW1Q8N7I0 195 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 ZNF283Q8N7M2 679 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 SUMF2Q8NBJ7 301 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 VN1R2Q8NFZ6 395 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 OR10AC1Q8NH08 325 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 ZNRF4Q8WWF5 429 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 LCN9Q8WX39 176 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 TMEM37Q8WXS4 190 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 CDS1Q92903 461 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 SLC41A3Q96GZ6 507 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 PCED1BQ96HM7 432 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 SMIM8Q96KF7 97 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 FRG2BQ96QU4 278 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 SLC6A7Q99884 636 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 SCRT1Q9BWW7 348 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 CSTL1Q9H114 145 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 OR2AG1Q9H205 316 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 CERS4Q9HA82 394 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 POPDC3Q9HBV1 291 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 KCNJ16Q9NPI9 418 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 TM7SF3Q9NS93 570 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 SEMA4GQ9NTN9 838 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 HAO2Q9NYQ3 351 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 SH2B3Q9UQQ2 575 aa3.34□□□□□ -1.88
MCF2-210ENST00000536274 TSC2P49815 1807 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 ANKRD36A6QL64 1941 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 PDCD11Q14690 1871 aaKnown RBP3.33□□□□□ -1.88
MCF2-210ENST00000536274 KCNE1BA0A087WTH5 132 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 A0A087WUJ7 227 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 TRBV2A0A0J9YWF9 115 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 A0A0U1RQV5 110 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 A0A1B0GTI1 187 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 A0A1B0GVT2 93 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 NAP1L6A6NFF2 107 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 HSBP1L1C9JCN9 74 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 F8VVB4 439 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 F8VWA3 439 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 H3BQ15 152 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 MPZL1O95297 269 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 AHSA1O95433 338 aa3.33□□□□□ -1.88
MCF2-210ENST00000536274 CELA2BP08218 269 aaPredicted RBP3.33□□□□□ -1.88
MCF2-210ENST00000536274 NT5EP21589 574 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms