RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 F5H5P2 479 aa13.59□□□□□ -0.23
CLSTN3-204ENST00000535313 TRAPPC2LH3BP13 241 aa13.59□□□□□ -0.23
CLSTN3-204ENST00000535313 MLNRO43193 412 aa13.59□□□□□ -0.23
CLSTN3-204ENST00000535313 CYB5R3P00387 301 aaPredicted RBP13.59□□□□□ -0.23
CLSTN3-204ENST00000535313 RPS2P15880 293 aaKnown RBP13.59□□□□□ -0.23
CLSTN3-204ENST00000535313 ZNF12P17014 697 aa13.59□□□□□ -0.23
CLSTN3-204ENST00000535313 CFPP27918 469 aa13.59□□□□□ -0.23
CLSTN3-204ENST00000535313 HMGA2P52926 109 aa13.59□□□□□ -0.23
CLSTN3-204ENST00000535313 GK2Q14410 553 aaPredicted RBP13.59□□□□□ -0.23
CLSTN3-204ENST00000535313 ZNF181Q2M3W8 571 aa13.59□□□□□ -0.23
CLSTN3-204ENST00000535313 CYP2R1Q6VVX0 501 aa13.59□□□□□ -0.23
CLSTN3-204ENST00000535313 PGAP1Q75T13 922 aa13.59□□□□□ -0.23
CLSTN3-204ENST00000535313 FITM2Q8N6M3 262 aa13.59□□□□□ -0.23
CLSTN3-204ENST00000535313 OR9Q2Q8NGE9 314 aa13.59□□□□□ -0.23
CLSTN3-204ENST00000535313 OR2T4Q8NH00 348 aa13.59□□□□□ -0.23
CLSTN3-204ENST00000535313 SPRYD4Q8WW59 207 aaPredicted RBP13.59□□□□□ -0.23
CLSTN3-204ENST00000535313 SPTSSAQ969W0 71 aa13.59□□□□□ -0.23
CLSTN3-204ENST00000535313 TRIM15Q9C019 465 aa13.59□□□□□ -0.23
CLSTN3-204ENST00000535313 PNRC2Q9NPJ4 139 aaKnown RBP13.59□□□□□ -0.23
CLSTN3-204ENST00000535313 DDX28Q9NUL7 540 aaKnown RBP13.59□□□□□ -0.23
CLSTN3-204ENST00000535313 MRPL22Q9NWU5 206 aaKnown RBP13.59□□□□□ -0.23
CLSTN3-204ENST00000535313 NUP50Q9UKX7 468 aa13.59□□□□□ -0.23
CLSTN3-204ENST00000535313 TMEM89A2RUT3 159 aa13.58□□□□□ -0.24
CLSTN3-204ENST00000535313 M0R135 149 aa13.58□□□□□ -0.24
CLSTN3-204ENST00000535313 CCNB2O95067 398 aa13.58□□□□□ -0.24
CLSTN3-204ENST00000535313 ZNF205O95201 554 aa13.58□□□□□ -0.24
CLSTN3-204ENST00000535313 HLA-DPB1P04440 258 aa13.58□□□□□ -0.24
CLSTN3-204ENST00000535313 WNT2P09544 360 aa13.58□□□□□ -0.24
CLSTN3-204ENST00000535313 IRF2P14316 349 aa13.58□□□□□ -0.24
CLSTN3-204ENST00000535313 PYCR1P32322 319 aa13.58□□□□□ -0.24
CLSTN3-204ENST00000535313 COMPP49747 757 aaPredicted RBP13.58□□□□□ -0.24
CLSTN3-204ENST00000535313 MRPL21Q7Z2W9 205 aaKnown RBP13.58□□□□□ -0.24
CLSTN3-204ENST00000535313 NAA40Q86UY6 237 aa13.58□□□□□ -0.24
CLSTN3-204ENST00000535313 CYB561A3Q8NBI2 242 aa13.58□□□□□ -0.24
CLSTN3-204ENST00000535313 SLCO4A1Q96BD0 722 aa13.58□□□□□ -0.24
CLSTN3-204ENST00000535313 ZNF799Q96GE5 643 aa13.58□□□□□ -0.24
CLSTN3-204ENST00000535313 PLEKHA8Q96JA3 519 aa13.58□□□□□ -0.24
CLSTN3-204ENST00000535313 BTBD10Q9BSF8 475 aa13.58□□□□□ -0.24
CLSTN3-204ENST00000535313 SSBP3Q9BWW4 388 aaPredicted RBP13.58□□□□□ -0.24
CLSTN3-204ENST00000535313 TMEM165Q9HC07 324 aa13.58□□□□□ -0.24
CLSTN3-204ENST00000535313 TBC1D23Q9NUY8 699 aa13.58□□□□□ -0.24
CLSTN3-204ENST00000535313 ACTR3BQ9P1U1 418 aa13.58□□□□□ -0.24
CLSTN3-204ENST00000535313 MIOXQ9UGB7 285 aa13.58□□□□□ -0.24
CLSTN3-204ENST00000535313 TVP23AA6NH52 213 aa13.57□□□□□ -0.24
CLSTN3-204ENST00000535313 BHLHE40O14503 412 aa13.57□□□□□ -0.24
CLSTN3-204ENST00000535313 RAD23AP54725 363 aa13.57□□□□□ -0.24
CLSTN3-204ENST00000535313 PRSS12P56730 875 aa13.57□□□□□ -0.24
CLSTN3-204ENST00000535313 GNB2P62879 340 aa13.57□□□□□ -0.24
CLSTN3-204ENST00000535313 BTNL3Q6UXE8 466 aa13.57□□□□□ -0.24
CLSTN3-204ENST00000535313 RASSF6Q6ZTQ3 369 aa13.57□□□□□ -0.24
CLSTN3-204ENST00000535313 NLRC3Q7RTR2 1065 aa13.57□□□□□ -0.24
CLSTN3-204ENST00000535313 KLBQ86Z14 1044 aa13.57□□□□□ -0.24
CLSTN3-204ENST00000535313 CELF2-AS1Q8N7Q2 184 aa13.57□□□□□ -0.24
CLSTN3-204ENST00000535313 C3orf56Q8N813 242 aa13.57□□□□□ -0.24
CLSTN3-204ENST00000535313 ZDHHC22Q8N966 263 aa13.57□□□□□ -0.24
CLSTN3-204ENST00000535313 CCDC197Q8NCU1 140 aa13.57□□□□□ -0.24
CLSTN3-204ENST00000535313 OR4C15Q8NGM1 316 aa13.57□□□□□ -0.24
CLSTN3-204ENST00000535313 OR11L1Q8NGX0 322 aa13.57□□□□□ -0.24
CLSTN3-204ENST00000535313 DVL3Q92997 716 aaPredicted RBP13.57□□□□□ -0.24
CLSTN3-204ENST00000535313 ERGIC1Q969X5 290 aa13.57□□□□□ -0.24
CLSTN3-204ENST00000535313 MAP6Q96JE9 813 aa13.57□□□□□ -0.24
CLSTN3-204ENST00000535313 ESM1Q9NQ30 184 aa13.57□□□□□ -0.24
CLSTN3-204ENST00000535313 IL20Q9NYY1 176 aa13.57□□□□□ -0.24
CLSTN3-204ENST00000535313 NOP16Q9Y3C1 178 aaKnown RBP13.57□□□□□ -0.24
CLSTN3-204ENST00000535313 A0A1B0GWJ7 208 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 B2RBV5 119 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 FSTL3O95633 263 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 GASTP01350 101 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 ATP6V1B2P21281 511 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 MAGEA2P43356 314 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 GATA4P43694 442 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 ZNF404Q494X3 552 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 ZNF770Q6IQ21 691 aaPredicted RBP13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 LRRN1Q6UXK5 716 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 ARHGAP24Q8N264 748 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 AQP11Q8NBQ7 271 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 SLC37A3Q8NCC5 494 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 OR8B3Q8NGG8 313 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 OR51L1Q8NGJ5 315 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 BCAS4Q8TDM0 211 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 NEIL1Q96FI4 390 aaPredicted RBP13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 OR8B2Q96RD0 313 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 DDOQ99489 341 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 TMEM246Q9BRR3 403 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 TSSK6Q9BXA6 273 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 PLA2G12AQ9BZM1 189 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 SLC22A4Q9H015 551 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 MUC13Q9H3R2 512 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 MAGIXQ9H6Y5 334 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 ZNF69Q9UC07 566 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 PPIAL4AQ9Y536 164 aa13.56□□□□□ -0.24
CLSTN3-204ENST00000535313 FMO3P31513 532 aa13.55□□□□□ -0.24
CLSTN3-204ENST00000535313 PMELP40967 661 aa13.55□□□□□ -0.24
CLSTN3-204ENST00000535313 CD200P41217 278 aa13.55□□□□□ -0.24
CLSTN3-204ENST00000535313 RPS27P42677 84 aaKnown RBP13.55□□□□□ -0.24
CLSTN3-204ENST00000535313 UBA52P62987 128 aaKnown RBP13.55□□□□□ -0.24
CLSTN3-204ENST00000535313 PAX8Q06710 450 aa13.55□□□□□ -0.24
CLSTN3-204ENST00000535313 MAB21L1Q13394 359 aa13.55□□□□□ -0.24
CLSTN3-204ENST00000535313 TAF13Q15543 124 aa13.55□□□□□ -0.24
CLSTN3-204ENST00000535313 OR8G1Q15617 311 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms