RNA–Protein interactions for RNA: ENST00000534296.5

CD44-238, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-238ENST00000534296 GPR21Q99679 349 aa1.64□□□□□ -2.15
CD44-238ENST00000534296 BPIFA3Q9BQP9 254 aa1.64□□□□□ -2.15
CD44-238ENST00000534296 TEKT3Q9BXF9 490 aa1.64□□□□□ -2.15
CD44-238ENST00000534296 SLC7A5P2Q9GIP4 190 aa1.64□□□□□ -2.15
CD44-238ENST00000534296 ELOVL6Q9H5J4 265 aa1.64□□□□□ -2.15
CD44-238ENST00000534296 NTN4Q9HB63 628 aa1.64□□□□□ -2.15
CD44-238ENST00000534296 SIRT7Q9NRC8 400 aa1.64□□□□□ -2.15
CD44-238ENST00000534296 RHBDL2Q9NX52 303 aa1.64□□□□□ -2.15
CD44-238ENST00000534296 MYEF2Q9P2K5 600 aaKnown RBP1.64□□□□□ -2.15
CD44-238ENST00000534296 DDX19BQ9UMR2 479 aa1.64□□□□□ -2.15
CD44-238ENST00000534296 WDR62O43379 1518 aa1.64□□□□□ -2.15
CD44-238ENST00000534296 UBN2Q6ZU65 1347 aa1.64□□□□□ -2.15
CD44-238ENST00000534296 INSRP06213 1382 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 COL22A1Q8NFW1 1626 aaPredicted RBP1.63□□□□□ -2.15
CD44-238ENST00000534296 IGHV1OR15-9A0A0B4J2B8 117 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 IGHV1-69DA0A0B4J2H0 117 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 A0A1B0GVX0 72 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 SERTM2A0A1B0GWG4 89 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 LRCOL1A6NCL2 159 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 A6NDN8 102 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 PDZK1P1A8MUH7 402 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 NDUFC2-KCTD14E9PQ53 114 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 H7C417 338 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 BPY2O14599 106 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 SLC9A3R1O14745 358 aaPredicted RBP1.63□□□□□ -2.15
CD44-238ENST00000534296 FCN3O75636 299 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 RP2O75695 350 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 YIF1AO95070 293 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 RCBTB2O95199 551 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 HLA-DQA1P01909 254 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 GLAP06280 429 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 ZNF806P0C7X5 589 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 TCP1P17987 556 aaKnown RBP1.63□□□□□ -2.15
CD44-238ENST00000534296 CSNK2A2P19784 350 aaPredicted RBP1.63□□□□□ -2.15
CD44-238ENST00000534296 HTR1DP28221 377 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 PCK1P35558 622 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 RFC3P40938 356 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 OPRK1P41145 380 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 ERFP50548 548 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 CCNG1P51959 295 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 CRADDP78560 199 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 CDK5Q00535 292 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 CYP24A1Q07973 514 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 NAB1Q13506 487 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 RCAN2Q14206 197 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 TRMT5Q32P41 509 aaKnown RBP1.63□□□□□ -2.15
CD44-238ENST00000534296 YIF1BQ5BJH7 314 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 ZNF684Q5T5D7 378 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 MLIPQ5VWP3 458 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 ZFP1Q6P2D0 407 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 SLC25A34Q6PIV7 304 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 CEMP1Q6PRD7 247 aaPredicted RBP1.63□□□□□ -2.15
CD44-238ENST00000534296 TMEM220Q6QAJ8 160 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 NPSR1Q6W5P4 371 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 FBXW12Q6X9E4 464 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 NEGR1Q7Z3B1 354 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 TMCO2Q7Z6W1 182 aaPredicted RBP1.63□□□□□ -2.15
CD44-238ENST00000534296 MYOCDQ8IZQ8 938 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 NRGNQ92686 78 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 RAB1CQ92928 201 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 APH1AQ96BI3 265 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 RCN3Q96D15 328 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 NRBF2Q96F24 287 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 DUS3LQ96G46 650 aaKnown RBP1.63□□□□□ -2.15
CD44-238ENST00000534296 BTN2A3PQ96KV6 586 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 FOXC2Q99958 501 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 RTBDNQ9BSG5 229 aaPredicted RBP1.63□□□□□ -2.15
CD44-238ENST00000534296 ANKRD60Q9BZ19 345 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 UBE2ZQ9H832 354 aaPredicted RBP1.63□□□□□ -2.15
CD44-238ENST00000534296 C12orf10Q9HB07 376 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 FBXO6Q9NRD1 293 aaPredicted RBP1.63□□□□□ -2.15
CD44-238ENST00000534296 CLN6Q9NWW5 311 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 IFNKQ9P0W0 207 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 RABL2AQ9UBK7 228 aaPredicted RBP1.63□□□□□ -2.15
CD44-238ENST00000534296 MTFP1Q9UDX5 166 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 PHLPP2Q6ZVD8 1323 aa1.63□□□□□ -2.15
CD44-238ENST00000534296 BRCA1P38398 1863 aaKnown RBP1.63□□□□□ -2.15
CD44-238ENST00000534296 CENPVL3A0A0U1RRI6 287 aa1.62□□□□□ -2.15
CD44-238ENST00000534296 GABRR3A8MPY1 467 aa1.62□□□□□ -2.15
CD44-238ENST00000534296 CENPXA8MT69 81 aa1.62□□□□□ -2.15
CD44-238ENST00000534296 TEX46H3BTG2 121 aa1.62□□□□□ -2.15
CD44-238ENST00000534296 RRP8O43159 456 aaKnown RBP1.62□□□□□ -2.15
CD44-238ENST00000534296 SCO1O75880 301 aa1.62□□□□□ -2.15
CD44-238ENST00000534296 LCA5LO95447 670 aa1.62□□□□□ -2.15
CD44-238ENST00000534296 PTHP01270 115 aa1.62□□□□□ -2.15
CD44-238ENST00000534296 FGF4P08620 206 aa1.62□□□□□ -2.15
CD44-238ENST00000534296 STAG3L3P0CL85 134 aa1.62□□□□□ -2.15
CD44-238ENST00000534296 OR8G3PP0DMU2 310 aa1.62□□□□□ -2.15
CD44-238ENST00000534296 MUC1P15941 1255 aaPredicted RBP1.62□□□□□ -2.15
CD44-238ENST00000534296 RAB4AP20338 218 aa1.62□□□□□ -2.15
CD44-238ENST00000534296 PMELP40967 661 aa1.62□□□□□ -2.15
CD44-238ENST00000534296 GPR1P46091 355 aa1.62□□□□□ -2.15
CD44-238ENST00000534296 CXCL12P48061 93 aa1.62□□□□□ -2.15
CD44-238ENST00000534296 PSMD4P55036 377 aaKnown RBP1.62□□□□□ -2.15
CD44-238ENST00000534296 ZNF121P58317 390 aaPredicted RBP1.62□□□□□ -2.15
CD44-238ENST00000534296 TAS2R31P59538 309 aa1.62□□□□□ -2.15
CD44-238ENST00000534296 RPL23P62829 140 aaKnown RBP1.62□□□□□ -2.15
CD44-238ENST00000534296 LOXL1Q08397 574 aaPredicted RBP1.62□□□□□ -2.15
CD44-238ENST00000534296 STK38Q15208 465 aa1.62□□□□□ -2.15
CD44-238ENST00000534296 RBMY1FQ15415 496 aaKnown RBP1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms