RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 OTX1P32242 354 aaPredicted RBP2.96□□□□□ -1.94
CSMD3-210ENST00000534172 RAB5BP61020 215 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 RAP1BP61224 184 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 PKIAP61925 76 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 SLC7A9P82251 487 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 PAX5Q02548 391 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 SIGLEC14Q08ET2 396 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 ECH1Q13011 328 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 ITPK1Q13572 414 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 C9orf64Q5T6V5 341 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 ANKRD22Q5VYY1 191 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 REP15Q6BDI9 236 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 TEX261Q6UWH6 196 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 METTL7BQ6UX53 244 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 H2BFWTQ7Z2G1 175 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 SCD5Q86SK9 330 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 MRPL52Q86TS9 123 aaKnown RBP2.96□□□□□ -1.94
CSMD3-210ENST00000534172 RANBP3LQ86VV4 465 aaPredicted RBP2.96□□□□□ -1.94
CSMD3-210ENST00000534172 OR4N5Q8IXE1 308 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 SELENOHQ8IZQ5 122 aaKnown RBP2.96□□□□□ -1.94
CSMD3-210ENST00000534172 GVQW1Q8N7I0 195 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 GDPD1Q8N9F7 314 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 PROKR2Q8NFJ6 384 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 OR1F12Q8NHA8 337 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 OR2V1Q8NHB1 315 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 RHOXF1Q8NHV9 184 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 RPLP0P6Q8NHW5 317 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 ACTL9Q8TC94 416 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 TCTEX1D2Q8WW35 142 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 SLC7A6Q92536 515 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 TMEM203Q969S6 136 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 PNPLA2Q96AD5 504 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 MS4A14Q96JA4 679 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 HYLS1Q96M11 299 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 EBNA1BP2Q99848 306 aaKnown RBP2.96□□□□□ -1.94
CSMD3-210ENST00000534172 KCTD14Q9BQ13 255 aaPredicted RBP2.96□□□□□ -1.94
CSMD3-210ENST00000534172 ING2Q9H160 280 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 ALG9Q9H6U8 611 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 CCNB1IP1Q9NPC3 277 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 IL1RAPQ9NPH3 570 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 TAS2R9Q9NYW1 312 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 METTL1Q9UBP6 276 aaKnown RBP2.96□□□□□ -1.94
CSMD3-210ENST00000534172 SEC14L4Q9UDX3 406 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 POFUT2Q9Y2G5 429 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 MRPS18CQ9Y3D5 142 aaKnown RBP2.96□□□□□ -1.94
CSMD3-210ENST00000534172 U3KQ87 197 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 SNED1Q8TER0 1413 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 DDX60LQ5H9U9 1706 aaKnown RBP2.96□□□□□ -1.94
CSMD3-210ENST00000534172 MYH4Q9Y623 1939 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 NCOR1O75376 2440 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 ZNF292O60281 2723 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 A0A1W2PR80 420 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 SERPINE3A8MV23 424 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 COPEO14579 308 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 PSTPIP1O43586 416 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 SRPX2O60687 465 aaPredicted RBP2.96□□□□□ -1.94
CSMD3-210ENST00000534172 SH3BGRLO75368 114 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 SNAPC5O75971 98 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 AMBPP02760 352 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 DDTP30046 118 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 MMP12P39900 470 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 ID1P41134 155 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 IDH3GP51553 393 aaPredicted RBP2.96□□□□□ -1.94
CSMD3-210ENST00000534172 XKP51811 444 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 NDUFA8P51970 172 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 PLP1P60201 277 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 VLDLRP98155 873 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 ZP4Q12836 540 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 AQP6Q13520 282 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 TRAM1Q15629 374 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 ZNF239Q16600 458 aaKnown RBP2.96□□□□□ -1.94
CSMD3-210ENST00000534172 PTPN20Q4JDL3 420 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 FAAP20Q6NZ36 180 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 LPCAT3Q6P1A2 487 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 MED27Q6P2C8 311 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 PNCKQ6P2M8 343 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 CYHR1Q6ZMK1 362 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 PRSS48Q7RTY5 328 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 ZNF329Q86UD4 541 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 MYPOPQ86VE0 399 aaPredicted RBP2.96□□□□□ -1.94
CSMD3-210ENST00000534172 KCNMB4Q86W47 210 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 ZBTB8OSQ8IWT0 167 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 OR5AP2Q8NGF4 316 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 OR5T3Q8NGG3 340 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 OR51L1Q8NGJ5 315 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 OR10G8Q8NGN5 311 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 OR13C9Q8NGT0 318 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 OR4K15Q8NH41 348 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 FAM110BQ8TC76 370 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 DCAKDQ8WVC6 231 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 ARNTL2Q8WYA1 636 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 AP3S1Q92572 193 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 MYLPFQ96A32 169 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 MED8Q96G25 268 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 GMPPAQ96IJ6 420 aaPredicted RBP2.96□□□□□ -1.94
CSMD3-210ENST00000534172 PACRGQ96M98 296 aaPredicted RBP2.96□□□□□ -1.94
CSMD3-210ENST00000534172 FOXN4Q96NZ1 517 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 PSMB7Q99436 277 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 P2RY13Q9BPV8 354 aa2.96□□□□□ -1.94
CSMD3-210ENST00000534172 KIR3DX1Q9H7L2 352 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms