RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 P2RX2Q9UBL9 471 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 AURKCQ9UQB9 309 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 LYVE1Q9Y5Y7 322 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 KMT2AQ03164 3969 aa8.36□□□□□ -1.07
CSDE1-215ENST00000533818 IGLV1-36A0A0B4J1U3 117 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 A0A1W2PRG6 482 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 PSMB11A5LHX3 300 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 FAM90A8PA6NJQ4 464 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 A6NLC8 198 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 TMEM233B4DJY2 109 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 J3QW42 95 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 ACOT8O14734 319 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 BCHEP06276 602 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 PRSS12P56730 875 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 DNAJB13P59910 316 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 CD47Q08722 323 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 NFYCQ13952 458 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 CASP8Q14790 479 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 UGT3A2Q3SY77 523 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 SLC25A47Q6Q0C1 308 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 HDDC2Q7Z4H3 204 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 ZNF329Q86UD4 541 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 ZNF695Q8IW36 515 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 MKXQ8IYA7 352 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 OR9Q1Q8NGQ5 310 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 SLC38A5Q8WUX1 472 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 NMD3Q96D46 503 aaKnown RBP8.35□□□□□ -1.07
CSDE1-215ENST00000533818 RNFT2Q96EX2 444 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 MRPL15Q9P015 296 aaKnown RBP8.35□□□□□ -1.07
CSDE1-215ENST00000533818 ZNF180Q9UJW8 692 aa8.35□□□□□ -1.07
CSDE1-215ENST00000533818 UBR4Q5T4S7 5183 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 A0A0G2JPF8 293 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 GMNCA6NCL1 334 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 CCDC154A6NI56 674 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 HNRNPCL2B2RXH8 293 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 HNRNPCL3B7ZW38 293 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 BLOC1S5-TXNDC5H3BN57 136 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 SGCEO43556 437 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 HNRNPCL1O60812 293 aaKnown RBP8.34□□□□□ -1.07
CSDE1-215ENST00000533818 DEDDO75618 318 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 RHBDL1O75783 438 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 PTBP3O95758 552 aaKnown RBP8.34□□□□□ -1.07
CSDE1-215ENST00000533818 GRPP07492 148 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 HNRNPCL4P0DMR1 293 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 SELLP14151 372 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 MUC1P15941 1255 aaPredicted RBP8.34□□□□□ -1.07
CSDE1-215ENST00000533818 TCP1P17987 556 aaKnown RBP8.34□□□□□ -1.07
CSDE1-215ENST00000533818 CA6P23280 308 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 COX7A1P24310 79 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 AZGP1P25311 298 aaKnown RBP8.34□□□□□ -1.07
CSDE1-215ENST00000533818 PRKAR1BP31321 381 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 GGT2P36268 569 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 TGM4P49221 684 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 SSX2Q16385 188 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 ZNF74Q16587 644 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 ABCA11PQ4W5N1 156 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 C16orf89Q6UX73 402 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 TIFABQ6ZNK6 161 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 TRIML2Q8N7C3 387 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 GOLGA6L1Q8N7Z2 621 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 APOBEC3DQ96AK3 386 aaPredicted RBP8.34□□□□□ -1.07
CSDE1-215ENST00000533818 TMEM27Q9HBJ8 222 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 PPP2R2CQ9Y2T4 447 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 SORL1Q92673 2214 aa8.34□□□□□ -1.07
CSDE1-215ENST00000533818 A0A0B4J2E0 115 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 A0A1B0GX12 115 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 A0A1W2PPL8 197 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 TRIM64CA6NLI5 447 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 FMO6PO60774 539 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 DBHP09172 617 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 NR2C1P13056 603 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 NDUFB7P17568 137 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 MSR1P21757 451 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 DAP3P51398 398 aaKnown RBP8.33□□□□□ -1.08
CSDE1-215ENST00000533818 INSL3P51460 131 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 UGT2B15P54855 530 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 CDH12P55289 794 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 NCALDP61601 193 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 SCRN3Q0VDG4 424 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 OR1Q1Q15612 314 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 PCK2Q16822 640 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 ZDHHC24Q6UX98 284 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 ZNF621Q6ZSS3 439 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 CREG2Q8IUH2 290 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 SPRYD4Q8WW59 207 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-215ENST00000533818 CAPSLQ8WWF8 208 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 HDAC2Q92769 488 aaKnown RBP8.33□□□□□ -1.08
CSDE1-215ENST00000533818 FOXRED1Q96CU9 486 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-215ENST00000533818 MALSU1Q96EH3 234 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 NINJ2Q9NZG7 142 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 STX18Q9P2W9 335 aaKnown RBP8.33□□□□□ -1.08
CSDE1-215ENST00000533818 EMCNQ9ULC0 261 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 NDUFAF1Q9Y375 327 aa8.33□□□□□ -1.08
CSDE1-215ENST00000533818 NOP16Q9Y3C1 178 aaKnown RBP8.33□□□□□ -1.08
CSDE1-215ENST00000533818 FGF4P08620 206 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 UMPSP11172 480 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 AMY2BP19961 511 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 BGNP21810 368 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 CNTFRP26992 372 aa8.32□□□□□ -1.08
CSDE1-215ENST00000533818 SERPINB5P36952 375 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms