RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 IFNGP01579 166 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 HLA-DPB1P04440 258 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 RAP2AP10114 183 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 FMO3P31513 532 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 SRP9P49458 86 aaKnown RBP8.8□□□□□ -1
CAPN1-225ENST00000533704 MMP16P51512 607 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 PRKXP51817 358 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 BTG1P62324 171 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 SCGB2A2Q13296 93 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 ZMYND11Q15326 602 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 SLC27A4Q6P1M0 643 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 C1orf229Q6ZS94 237 aaPredicted RBP8.8□□□□□ -1
CAPN1-225ENST00000533704 MRPL21Q7Z2W9 205 aaKnown RBP8.8□□□□□ -1
CAPN1-225ENST00000533704 DCXRQ7Z4W1 244 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 MOGAT3Q86VF5 341 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 LNX2Q8N448 690 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 IQCF1Q8N6M8 205 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 ZNF511Q8NB15 262 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 OR2T33Q8NG76 320 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 TEX47Q8TBZ9 253 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 GIPC3Q8TF64 312 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 SPRYD4Q8WW59 207 aaPredicted RBP8.8□□□□□ -1
CAPN1-225ENST00000533704 SPTSSAQ969W0 71 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 SLCO4A1Q96BD0 722 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 ASB9Q96DX5 294 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 ZNF799Q96GE5 643 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 MEGF10Q96KG7 1140 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 COPS4Q9BT78 406 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 C1QTNF5Q9BXJ0 243 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 DGCR6LQ9BY27 220 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 TMPRSS13Q9BYE2 586 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 C7orf69Q9H7B7 122 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 GCM1Q9NP62 436 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 PNRC2Q9NPJ4 139 aaKnown RBP8.8□□□□□ -1
CAPN1-225ENST00000533704 TMEM100Q9NV29 134 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 KCNG2Q9UJ96 466 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 BAIAP2Q9UQB8 552 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 COMMD3-BMI1R4GMX3 469 aa8.8□□□□□ -1
CAPN1-225ENST00000533704 SVEP1Q4LDE5 3571 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 GGT3PA6NGU5 568 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 TMEM178BH3BS89 294 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 ZNF593O00488 134 aaPredicted RBP8.79□□□□□ -1
CAPN1-225ENST00000533704 MLNRO43193 412 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 E2F6O75461 281 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 CLUP10909 449 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 SLC2A1P11166 492 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 PSKH1P11801 424 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 SELEP16581 610 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 ZNF3P17036 446 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 SPI1P17947 270 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 EPHA1P21709 976 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 ZFP36P26651 326 aaKnown RBP8.79□□□□□ -1
CAPN1-225ENST00000533704 POU1F1P28069 291 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 MDH2P40926 338 aaKnown RBP8.79□□□□□ -1
CAPN1-225ENST00000533704 ENTPD1P49961 510 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 SEC61A1P61619 476 aaKnown RBP8.79□□□□□ -1
CAPN1-225ENST00000533704 GK2Q14410 553 aaPredicted RBP8.79□□□□□ -1
CAPN1-225ENST00000533704 KRTAP27-1Q3LI81 207 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 COLCA1Q6ZS62 124 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 PGAP1Q75T13 922 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 TRPM8Q7Z2W7 1104 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 SPATA24Q86W54 205 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 ADGRG5Q8IZF4 528 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 TEX29Q8N6K0 151 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 OR10S1Q8NGN2 331 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 OR2AE1Q8NHA4 323 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 ZNF418Q8TF45 676 aaPredicted RBP8.79□□□□□ -1
CAPN1-225ENST00000533704 SIGLEC11Q96RL6 698 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 DDOQ99489 341 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 FEVQ99581 238 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 NIPSNAP1Q9BPW8 284 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 SLC30A2Q9BRI3 323 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 RBM4Q9BWF3 364 aaKnown RBP8.79□□□□□ -1
CAPN1-225ENST00000533704 CHID1Q9BWS9 393 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 MED20Q9H944 212 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 PATZ1Q9HBE1 687 aaKnown RBP8.79□□□□□ -1
CAPN1-225ENST00000533704 FAM53CQ9NYF3 392 aa8.79□□□□□ -1
CAPN1-225ENST00000533704 DHRS12A0PJE2 317 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 FAM183AA6NL82 134 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 LRRC30A6NM36 301 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 J3QLI3 93 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 HAX1O00165 279 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 ACOT8O14734 319 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 GYG2O15488 501 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 VENTXO95231 258 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 IRF2P14316 349 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 RAD23AP54725 363 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 EIF2B1Q14232 305 aaKnown RBP8.78□□□□□ -1
CAPN1-225ENST00000533704 OR8G1Q15617 311 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 SNAI3Q3KNW1 292 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 TMEM155Q4W5P6 130 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 ESCO2Q56NI9 601 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 FAM201AQ5SY85 155 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 ZNF362Q5T0B9 420 aaPredicted RBP8.78□□□□□ -1
CAPN1-225ENST00000533704 PRAMEF6Q5VXH4 476 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 C1QL2Q7Z5L3 287 aa8.78□□□□□ -1
CAPN1-225ENST00000533704 LRRC28Q86X40 367 aaPredicted RBP8.78□□□□□ -1
CAPN1-225ENST00000533704 ERI1Q8IV48 349 aaKnown RBP8.78□□□□□ -1
CAPN1-225ENST00000533704 MUC20Q8N307 709 aaPredicted RBP8.78□□□□□ -1
CAPN1-225ENST00000533704 BPIFB2Q8N4F0 458 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms