RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 CCDC121Q6ZUS5 278 aa8.34□□□□□ -1.07
NUP98-220ENST00000533346 USP51Q70EK9 711 aa8.34□□□□□ -1.07
NUP98-220ENST00000533346 Q71RC1 249 aaPredicted RBP8.34□□□□□ -1.07
NUP98-220ENST00000533346 PRSS45Q7RTY3 260 aa8.34□□□□□ -1.07
NUP98-220ENST00000533346 NAA40Q86UY6 237 aa8.34□□□□□ -1.07
NUP98-220ENST00000533346 IQCF1Q8N6M8 205 aa8.34□□□□□ -1.07
NUP98-220ENST00000533346 ZNF283Q8N7M2 679 aa8.34□□□□□ -1.07
NUP98-220ENST00000533346 OR51L1Q8NGJ5 315 aa8.34□□□□□ -1.07
NUP98-220ENST00000533346 OR13G1Q8NGZ3 307 aa8.34□□□□□ -1.07
NUP98-220ENST00000533346 OTOSQ8NHW6 89 aa8.34□□□□□ -1.07
NUP98-220ENST00000533346 MSI2Q96DH6 328 aaKnown RBP8.34□□□□□ -1.07
NUP98-220ENST00000533346 ZNF582Q96NG8 517 aaPredicted RBP8.34□□□□□ -1.07
NUP98-220ENST00000533346 INTS14Q96SY0 518 aa8.34□□□□□ -1.07
NUP98-220ENST00000533346 PRRG3Q9BZD7 231 aa8.34□□□□□ -1.07
NUP98-220ENST00000533346 SLC22A4Q9H015 551 aa8.34□□□□□ -1.07
NUP98-220ENST00000533346 SP140LQ9H930 580 aa8.34□□□□□ -1.07
NUP98-220ENST00000533346 HAO2Q9NYQ3 351 aa8.34□□□□□ -1.07
NUP98-220ENST00000533346 LPAR3Q9UBY5 353 aa8.34□□□□□ -1.07
NUP98-220ENST00000533346 TMEFF2Q9UIK5 374 aaPredicted RBP8.34□□□□□ -1.07
NUP98-220ENST00000533346 FAM183AA6NL82 134 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 CLDN25C9JDP6 229 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 E9PQ18 207 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 SPRY3O43610 288 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 LMX1BO60663 402 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 LCATP04180 440 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 ALOX5APP20292 161 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 TNFSF4P23510 183 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 POU1F1P28069 291 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 DDOSTP39656 456 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 DVL1P1P54792 670 aaPredicted RBP8.33□□□□□ -1.08
NUP98-220ENST00000533346 LMO4P61968 165 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 TNFAIP6P98066 277 aaPredicted RBP8.33□□□□□ -1.08
NUP98-220ENST00000533346 DBPQ10586 325 aaPredicted RBP8.33□□□□□ -1.08
NUP98-220ENST00000533346 MALLQ13021 153 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 TRIP10Q15642 601 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 NXNL2Q5VZ03 156 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 C12orf73Q69YU5 71 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 FAM166AQ6J272 317 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 PLBD1Q6P4A8 553 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 DPY19L4Q7Z388 723 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 KLBQ86Z14 1044 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 CPOQ8IVL8 374 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 LINC01356Q8N9X3 169 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 PLPP7Q8NBV4 271 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 CLDND2Q8NHS1 167 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 LRTOMTQ8WZ04 291 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 GTF3AQ92664 365 aaKnown RBP8.33□□□□□ -1.08
NUP98-220ENST00000533346 ERGIC1Q969X5 290 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 MNTQ99583 582 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 TEAD3Q99594 435 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 MDFIQ99750 246 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 ABHD6Q9BV23 337 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 GABARAPL3Q9BY60 117 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 NIPAL2Q9H841 368 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 MSL2Q9HCI7 577 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 KRT84Q9NSB2 600 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 CDC42EP3Q9UKI2 254 aa8.33□□□□□ -1.08
NUP98-220ENST00000533346 ACOD1A6NK06 481 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 B4DSR2 109 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 H3BNX3 289 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 MLNRO43193 412 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 XRCC2O43543 280 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 SPARCP09486 303 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 ANPEPP15144 967 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 OPRL1P41146 370 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 CD200P41217 278 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 RPS27P42677 84 aaKnown RBP8.32□□□□□ -1.08
NUP98-220ENST00000533346 ERFP50548 548 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 TMED1Q13445 227 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 HLXQ14774 488 aaPredicted RBP8.32□□□□□ -1.08
NUP98-220ENST00000533346 SNAPC1Q16533 368 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 CARTPTQ16568 116 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 TSTQ16762 297 aaKnown RBP8.32□□□□□ -1.08
NUP98-220ENST00000533346 TMEM155Q4W5P6 130 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 AADACL4Q5VUY2 407 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 TMEM236Q5W0B7 351 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 OR2T2Q6IF00 324 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 PGAP1Q75T13 922 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 CXXC5Q7LFL8 322 aaKnown RBP8.32□□□□□ -1.08
NUP98-220ENST00000533346 SLC16A9Q7RTY1 509 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.32□□□□□ -1.08
NUP98-220ENST00000533346 AMIGO2Q86SJ2 522 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 OR52H1Q8NGJ2 320 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 OR6K6Q8NGW6 343 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 OR6N2Q8NGY6 317 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 RAB1CQ92928 201 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 TIMD4Q96H15 378 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 SIGLEC11Q96RL6 698 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 RBM4BQ9BQ04 359 aaKnown RBP8.32□□□□□ -1.08
NUP98-220ENST00000533346 SOX7Q9BT81 388 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 YIPF3Q9GZM5 350 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 OR51V1Q9H2C8 321 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 RGCCQ9H4X1 137 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 MED20Q9H944 212 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 YAE1D1Q9NRH1 226 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 TMEM106BQ9NUM4 274 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 TMEM100Q9NV29 134 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 TVP23BQ9NYZ1 205 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 USE1Q9NZ43 259 aa8.32□□□□□ -1.08
NUP98-220ENST00000533346 PTTG3PQ9NZH4 202 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms