RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 RPP14O95059 124 aaKnown RBP7.22□□□□□ -1.25
NEDD8-207ENST00000533242 ASAH2BP0C7U1 165 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 UBL4AP11441 157 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 DPP4P27487 766 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 INPP1P49441 399 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 CCR6P51684 374 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 GBX2P52951 348 aaPredicted RBP7.22□□□□□ -1.25
NEDD8-207ENST00000533242 RRAS2P62070 204 aaPredicted RBP7.22□□□□□ -1.25
NEDD8-207ENST00000533242 SNRPD2P62316 118 aaKnown RBP7.22□□□□□ -1.25
NEDD8-207ENST00000533242 ZNF117Q03924 483 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 RPL18Q07020 188 aaKnown RBP7.22□□□□□ -1.25
NEDD8-207ENST00000533242 GUSBP1Q15486 140 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 ELOA3BQ3SY89 546 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 MESTQ5EB52 335 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 TMEM255AQ5JRV8 349 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 HES5Q5TA89 166 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 LAMTOR1Q6IAA8 161 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 C22orf34Q6ZV56 151 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 CMIPQ8IY22 773 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 TCTE3Q8IZS6 198 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 MS4A15Q8N5U1 240 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 C10orf53Q8N6V4 93 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 POMGNT2Q8NAT1 580 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 ELOA3Q8NG57 546 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 OR10AC1Q8NH08 325 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 RPS4Y2Q8TD47 263 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 RNF138Q8WVD3 245 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 MAP6Q96JE9 813 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 FOXN4Q96NZ1 517 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 GPX7Q96SL4 187 aaPredicted RBP7.22□□□□□ -1.25
NEDD8-207ENST00000533242 ZCCHC4Q9H5U6 513 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 RNF122Q9H9V4 155 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 SRA1Q9HD15 236 aaKnown RBP7.22□□□□□ -1.25
NEDD8-207ENST00000533242 NUDT15Q9NV35 164 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 KLHL21Q9UJP4 597 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 HIF3AQ9Y2N7 669 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 TLN2Q9Y4G6 2542 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 VPS13CQ709C8 3753 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 UPK3AO75631 287 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 TACR3P29371 465 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 TALDO1P37837 337 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 DSCR4P56555 118 aaPredicted RBP7.22□□□□□ -1.25
NEDD8-207ENST00000533242 CTXN1P60606 82 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 ACTA2P62736 377 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 ACTG2P63267 376 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 FAPQ12884 760 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 PLA2G7Q13093 441 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 TRAM1Q15629 374 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 WBP2NLQ6ICG8 309 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 RPL22L1Q6P5R6 122 aaKnown RBP7.22□□□□□ -1.25
NEDD8-207ENST00000533242 UNQ9370/PRO34162Q6UXP9 181 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 SERPINA12Q8IW75 414 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 CMTM4Q8IZR5 234 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 OR6V1Q8N148 313 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 OR51A4Q8NGJ6 313 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 TAAR8Q969N4 342 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 SLC25A38Q96DW6 304 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 TSPAN32Q96QS1 320 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 AMELYQ99218 206 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 NPAS1Q99742 590 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 OR10A4Q9H209 315 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 WDR76Q9H967 626 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 NANSQ9NR45 359 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 UBQLN4Q9NRR5 601 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 MRPL15Q9P015 296 aaKnown RBP7.22□□□□□ -1.25
NEDD8-207ENST00000533242 MRM2Q9UI43 246 aaKnown RBP7.22□□□□□ -1.25
NEDD8-207ENST00000533242 CACNG2Q9Y698 323 aa7.22□□□□□ -1.25
NEDD8-207ENST00000533242 LINC01387J3KSC0 135 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 OVOL3O00110 214 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 PHF1O43189 567 aaPredicted RBP7.21□□□□□ -1.26
NEDD8-207ENST00000533242 ZNF264O43296 627 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 SCO2O43819 266 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 TSPAN2O60636 221 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 GLCEO94923 617 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 AKR7A3O95154 331 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 IL33O95760 270 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 ABHD16AO95870 558 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 PLAUP00749 431 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 YES1P07947 543 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 CD14P08571 375 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 ADRA2CP18825 462 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 SRMP19623 302 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 GIFP27352 417 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 GZMKP49863 264 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 PSMD4P55036 377 aaKnown RBP7.21□□□□□ -1.26
NEDD8-207ENST00000533242 FCN2Q15485 313 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 CHRFAM7AQ494W8 412 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 ALG10Q5BKT4 473 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 FAM205BPQ63HN1 556 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 PYHIN1Q6K0P9 492 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 ADAM5Q6NVV9 412 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 MARCH3Q86UD3 253 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 TIGD4Q8IY51 512 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 MAPK1IP1LQ8NDC0 245 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 DNAAF1Q8NEP3 725 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 OR4K17Q8NGC6 315 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 OR11H7Q8NGC8 314 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 CREB3L1Q96BA8 519 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 PLPPR2Q96GM1 343 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 NKX3-1Q99801 234 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms