RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 TNFAIP6P98066 277 aaPredicted RBP13.04□□□□□ -0.32
CPSF1-210ENST00000532935 HFEQ30201 348 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 SPRNQ5BIV9 151 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 TMEM236Q5W0B7 351 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 OR2T2Q6IF00 324 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 FAM166AQ6J272 317 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 PLBD1Q6P4A8 553 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 ERI1Q8IV48 349 aaKnown RBP13.04□□□□□ -0.32
CPSF1-210ENST00000532935 OR5AS1Q8N127 324 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 PARP8Q8N3A8 854 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 OR2Z1Q8NG97 314 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 ST7LQ8TDW4 575 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 SLAMF6Q96DU3 332 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 ZNF799Q96GE5 643 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 INTS14Q96SY0 518 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 COPS4Q9BT78 406 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 TEX12Q9BXU0 123 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 OR51V1Q9H2C8 321 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 VCX3BQ9H321 246 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 NARFLQ9H6Q4 476 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 MARCH7Q9H992 704 aa13.04□□□□□ -0.32
CPSF1-210ENST00000532935 NKX1-2Q9UD57 310 aaPredicted RBP13.04□□□□□ -0.32
CPSF1-210ENST00000532935 CLDN25C9JDP6 229 aa13.03□□□□□ -0.32
CPSF1-210ENST00000532935 G3V2T6 193 aa13.03□□□□□ -0.32
CPSF1-210ENST00000532935 WNT9BO14905 357 aa13.03□□□□□ -0.32
CPSF1-210ENST00000532935 LMX1BO60663 402 aa13.03□□□□□ -0.32
CPSF1-210ENST00000532935 TNFSF4P23510 183 aa13.03□□□□□ -0.32
CPSF1-210ENST00000532935 OTX1P32242 354 aaPredicted RBP13.03□□□□□ -0.32
CPSF1-210ENST00000532935 SLC6A9P48067 706 aa13.03□□□□□ -0.32
CPSF1-210ENST00000532935 MALLQ13021 153 aa13.03□□□□□ -0.32
CPSF1-210ENST00000532935 TAF13Q15543 124 aa13.03□□□□□ -0.32
CPSF1-210ENST00000532935 DRAM2Q6UX65 266 aa13.03□□□□□ -0.32
CPSF1-210ENST00000532935 AMIGO2Q86SJ2 522 aa13.03□□□□□ -0.32
CPSF1-210ENST00000532935 CPOQ8IVL8 374 aa13.03□□□□□ -0.32
CPSF1-210ENST00000532935 OR6N2Q8NGY6 317 aa13.03□□□□□ -0.32
CPSF1-210ENST00000532935 CLDND2Q8NHS1 167 aa13.03□□□□□ -0.32
CPSF1-210ENST00000532935 LRTOMTQ8WZ04 291 aa13.03□□□□□ -0.32
CPSF1-210ENST00000532935 CCL17Q92583 94 aa13.03□□□□□ -0.32
CPSF1-210ENST00000532935 C1orf159Q96HA4 380 aa13.03□□□□□ -0.32
CPSF1-210ENST00000532935 PLEKHA8Q96JA3 519 aa13.03□□□□□ -0.32
CPSF1-210ENST00000532935 CENPMQ9NSP4 180 aa13.03□□□□□ -0.32
CPSF1-210ENST00000532935 TMEM160Q9NX00 188 aa13.03□□□□□ -0.32
CPSF1-210ENST00000532935 TREM2Q9NZC2 230 aa13.03□□□□□ -0.32
CPSF1-210ENST00000532935 KCNS2Q9ULS6 477 aa13.03□□□□□ -0.32
CPSF1-210ENST00000532935 MXRA5Q9NR99 2828 aa13.02□□□□□ -0.33
CPSF1-210ENST00000532935 ZNF878C9JN71 531 aa13.02□□□□□ -0.33
CPSF1-210ENST00000532935 TGFAP01135 160 aa13.02□□□□□ -0.33
CPSF1-210ENST00000532935 PRKXP51817 358 aa13.02□□□□□ -0.33
CPSF1-210ENST00000532935 CDH15P55291 814 aa13.02□□□□□ -0.33
CPSF1-210ENST00000532935 ESRRGP62508 458 aa13.02□□□□□ -0.33
CPSF1-210ENST00000532935 MVKQ03426 396 aa13.02□□□□□ -0.33
CPSF1-210ENST00000532935 EIF2B1Q14232 305 aaKnown RBP13.02□□□□□ -0.33
CPSF1-210ENST00000532935 GK2Q14410 553 aaPredicted RBP13.02□□□□□ -0.33
CPSF1-210ENST00000532935 AVPI1Q5T686 147 aa13.02□□□□□ -0.33
CPSF1-210ENST00000532935 SPATC1Q76KD6 591 aa13.02□□□□□ -0.33
CPSF1-210ENST00000532935 DPY19L4Q7Z388 723 aa13.02□□□□□ -0.33
CPSF1-210ENST00000532935 ZDHHC13Q8IUH4 622 aa13.02□□□□□ -0.33
CPSF1-210ENST00000532935 TIGD4Q8IY51 512 aa13.02□□□□□ -0.33
CPSF1-210ENST00000532935 LINC01356Q8N9X3 169 aa13.02□□□□□ -0.33
CPSF1-210ENST00000532935 BBS1Q8NFJ9 593 aa13.02□□□□□ -0.33
CPSF1-210ENST00000532935 OR8G5Q8NG78 346 aa13.02□□□□□ -0.33
CPSF1-210ENST00000532935 ZMYND19Q96E35 227 aaPredicted RBP13.02□□□□□ -0.33
CPSF1-210ENST00000532935 ZNF582Q96NG8 517 aaPredicted RBP13.02□□□□□ -0.33
CPSF1-210ENST00000532935 KCNJ15Q99712 375 aa13.02□□□□□ -0.33
CPSF1-210ENST00000532935 GABARAPL1Q9H0R8 117 aa13.02□□□□□ -0.33
CPSF1-210ENST00000532935 KRT84Q9NSB2 600 aa13.02□□□□□ -0.33
CPSF1-210ENST00000532935 TVP23BQ9NYZ1 205 aa13.02□□□□□ -0.33
CPSF1-210ENST00000532935 IQCF6A8MYZ5 107 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 H3BNX3 289 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 CASQ2O14958 399 aaPredicted RBP13.01□□□□□ -0.33
CPSF1-210ENST00000532935 PRODHO43272 600 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 MITFO75030 526 aaPredicted RBP13.01□□□□□ -0.33
CPSF1-210ENST00000532935 SELEP16581 610 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 VHLP40337 213 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 PRSS12P56730 875 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 GRB2P62993 217 aaKnown RBP13.01□□□□□ -0.33
CPSF1-210ENST00000532935 SLC3A1Q07837 685 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 PTGES3Q15185 160 aaKnown RBP13.01□□□□□ -0.33
CPSF1-210ENST00000532935 SNAPC1Q16533 368 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 SNAI3Q3KNW1 292 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 CHRFAM7AQ494W8 412 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 KLHL12Q53G59 568 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 SLC35D3Q5M8T2 416 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 KDM4DQ6B0I6 523 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 PGAP1Q75T13 922 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 CXXC5Q7LFL8 322 aaKnown RBP13.01□□□□□ -0.33
CPSF1-210ENST00000532935 SHFQ7M4L6 423 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 PRIMA1Q86XR5 153 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 PQLC1Q8N2U9 271 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 ZNF283Q8N7M2 679 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 BHLHE23Q8NDY6 225 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 OR13G1Q8NGZ3 307 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 RNF133Q8WVZ7 376 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 ITLN1Q8WWA0 313 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 PYDC1Q8WXC3 89 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 RAB1CQ92928 201 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 TIMD4Q96H15 378 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 SLC30A2Q9BRI3 323 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 IL19Q9UHD0 177 aa13.01□□□□□ -0.33
CPSF1-210ENST00000532935 CDC42EP3Q9UKI2 254 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms