RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 KIRREL2Q6UWL6 708 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 C16orf47Q6ZP98 133 aaPredicted RBP10.18□□□□□ -0.78
PTPRK-221ENST00000532331 NOXO1Q8NFA2 376 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 OR1M1Q8NGA1 313 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 DAZAP1Q96EP5 407 aaKnown RBP10.18□□□□□ -0.78
PTPRK-221ENST00000532331 SLC25A21Q9BQT8 299 aaPredicted RBP10.18□□□□□ -0.78
PTPRK-221ENST00000532331 ZMAT3Q9HA38 289 aaKnown RBP10.18□□□□□ -0.78
PTPRK-221ENST00000532331 TAS2R4Q9NYW5 299 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 A3GALT2U3KPV4 340 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 HS3ST1O14792 307 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 AKR1C1Q04828 323 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 ATPAF1Q5TC12 328 aaPredicted RBP10.18□□□□□ -0.78
PTPRK-221ENST00000532331 STEAP3Q658P3 488 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 DVL3Q92997 716 aaPredicted RBP10.18□□□□□ -0.78
PTPRK-221ENST00000532331 SEC22AQ96IW7 307 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 RASL10BQ96S79 203 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 CNTNAP3Q9BZ76 1288 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 HRH4Q9H3N8 390 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 ARRDC5A6NEK1 342 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 EFSO43281 561 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 SLC2A10O95528 541 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 SBK3P0C264 359 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 PPP3CBP16298 524 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 OMGP23515 440 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 LSRQ86X29 649 aaPredicted RBP10.18□□□□□ -0.78
PTPRK-221ENST00000532331 SPNS2Q8IVW8 549 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 REEP6Q96HR9 211 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 RAB1BQ9H0U4 201 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 FN3KRPQ9HA64 309 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 SLC25A19Q9HC21 320 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 A0A087WUJ7 227 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 TUBAL3A6NHL2 446 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 APOA2P02652 100 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 WNT1P04628 370 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 CEACAM1P13688 526 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 MAGEA5P43359 124 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 SLC25A45Q8N413 288 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 OR10X1Q8NGY0 326 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 WDR34Q96EX3 536 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 DUS3LQ96G46 650 aaKnown RBP10.18□□□□□ -0.78
PTPRK-221ENST00000532331 GON7Q9BXV9 100 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 OPA3Q9H6K4 179 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 UBTD1Q9HAC8 227 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 RANGRFQ9HD47 186 aaPredicted RBP10.18□□□□□ -0.78
PTPRK-221ENST00000532331 DLEC1Q9Y238 1755 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 LNP1A1A4G5 178 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 PPIHO43447 177 aaKnown RBP10.18□□□□□ -0.78
PTPRK-221ENST00000532331 IGFBP1P08833 259 aaPredicted RBP10.18□□□□□ -0.78
PTPRK-221ENST00000532331 THBS3P49746 956 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 CCR9P51686 369 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 SLC35A2P78381 396 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 EGR3Q06889 387 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 ELFN2Q5R3F8 820 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 FAM212BQ9NTI7 297 aaPredicted RBP10.18□□□□□ -0.78
PTPRK-221ENST00000532331 NUP205Q92621 2012 aa10.18□□□□□ -0.78
PTPRK-221ENST00000532331 COL11A1P12107 1806 aaPredicted RBP10.17□□□□□ -0.78
PTPRK-221ENST00000532331 PMS2P2O95744 297 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 CDC20Q12834 499 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 AGERQ15109 404 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 RBMXL3Q8N7X1 1067 aaKnown RBP10.17□□□□□ -0.78
PTPRK-221ENST00000532331 BANF2Q9H503 90 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 NPAP1Q9NZP6 1156 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 KIAA1456Q9P272 454 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 FBXL2Q9UKC9 423 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 ALG1L2C9J202 215 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 NKX2-8O15522 239 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 RPS19P39019 145 aaKnown RBP10.17□□□□□ -0.78
PTPRK-221ENST00000532331 HCCSP53701 268 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 ZNF74Q16587 644 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 SH2D5Q6ZV89 423 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 TMEM105Q8N8V8 129 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 OPALINQ96PE5 141 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 NARFLQ9H6Q4 476 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 PLEKHF2Q9H8W4 249 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 C19orf12Q9NSK7 152 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 TMEM74BQ9NUR3 256 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 TCRBV5S2A0A599 114 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 GABARAPH6UMI1 98 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 GMDSO60547 372 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 PTOV1Q86YD1 416 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 LGI3Q8N145 548 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 SYS1Q8N2H4 156 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 OR10J5Q8NHC4 309 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 SLC25A46Q96AG3 418 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 UHRF2Q96PU4 802 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 ARPC5LQ9BPX5 153 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 CDCA4Q9BXL8 241 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 ZCCHC4Q9H5U6 513 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 IKZF5Q9H5V7 419 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 MAP1BP46821 2468 aaKnown RBP10.17□□□□□ -0.78
PTPRK-221ENST00000532331 TRPM7Q96QT4 1865 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 GLAP06280 429 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 DEFA4P12838 97 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 CPEP16870 476 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 BAXQ07812 192 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 HFEQ30201 348 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 CST9LP1Q5W188 147 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 ZDHHC23Q8IYP9 409 aa10.17□□□□□ -0.78
PTPRK-221ENST00000532331 APOBEC3DQ96AK3 386 aaPredicted RBP10.17□□□□□ -0.78
PTPRK-221ENST00000532331 SHROOM3Q8TF72 1996 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms