RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 KCNG2Q9UJ96 466 aa14.09□□□□□ -0.15
CPSF1-207ENST00000531727 DNAJC9-AS1A6NH13 148 aa14.08□□□□□ -0.16
CPSF1-207ENST00000531727 LCATP04180 440 aa14.08□□□□□ -0.16
CPSF1-207ENST00000531727 HLA-DPB1P04440 258 aa14.08□□□□□ -0.16
CPSF1-207ENST00000531727 PPIAL4GP0DN37 164 aa14.08□□□□□ -0.16
CPSF1-207ENST00000531727 HKR1P10072 659 aa14.08□□□□□ -0.16
CPSF1-207ENST00000531727 PRTN3P24158 256 aa14.08□□□□□ -0.16
CPSF1-207ENST00000531727 MSX2P35548 267 aaPredicted RBP14.08□□□□□ -0.16
CPSF1-207ENST00000531727 PMELP40967 661 aa14.08□□□□□ -0.16
CPSF1-207ENST00000531727 GATA4P43694 442 aa14.08□□□□□ -0.16
CPSF1-207ENST00000531727 PRSS12P56730 875 aa14.08□□□□□ -0.16
CPSF1-207ENST00000531727 GNB2P62879 340 aa14.08□□□□□ -0.16
CPSF1-207ENST00000531727 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.08□□□□□ -0.16
CPSF1-207ENST00000531727 MALLQ13021 153 aa14.08□□□□□ -0.16
CPSF1-207ENST00000531727 ZNF404Q494X3 552 aa14.08□□□□□ -0.16
CPSF1-207ENST00000531727 SLC35F1Q5T1Q4 408 aa14.08□□□□□ -0.16
CPSF1-207ENST00000531727 PGBD2Q6P3X8 592 aa14.08□□□□□ -0.16
CPSF1-207ENST00000531727 LRRN1Q6UXK5 716 aa14.08□□□□□ -0.16
CPSF1-207ENST00000531727 NAA40Q86UY6 237 aa14.08□□□□□ -0.16
CPSF1-207ENST00000531727 BCL6BQ8N143 479 aaPredicted RBP14.08□□□□□ -0.16
CPSF1-207ENST00000531727 CELF2-AS1Q8N7Q2 184 aa14.08□□□□□ -0.16
CPSF1-207ENST00000531727 OR52E2Q8NGJ4 325 aa14.08□□□□□ -0.16
CPSF1-207ENST00000531727 SGMS2Q8NHU3 365 aa14.08□□□□□ -0.16
CPSF1-207ENST00000531727 PLEKHA8Q96JA3 519 aa14.08□□□□□ -0.16
CPSF1-207ENST00000531727 CDRT15Q96T59 188 aa14.08□□□□□ -0.16
CPSF1-207ENST00000531727 MRPL22Q9NWU5 206 aaKnown RBP14.08□□□□□ -0.16
CPSF1-207ENST00000531727 IGHV2-70DA0A0C4DH43 119 aa14.07□□□□□ -0.16
CPSF1-207ENST00000531727 SPRY1O43609 319 aaPredicted RBP14.07□□□□□ -0.16
CPSF1-207ENST00000531727 EGR1P18146 543 aa14.07□□□□□ -0.16
CPSF1-207ENST00000531727 TPTEP56180 551 aa14.07□□□□□ -0.16
CPSF1-207ENST00000531727 MAB21L1Q13394 359 aa14.07□□□□□ -0.16
CPSF1-207ENST00000531727 FAM201AQ5SY85 155 aa14.07□□□□□ -0.16
CPSF1-207ENST00000531727 BTNL3Q6UXE8 466 aa14.07□□□□□ -0.16
CPSF1-207ENST00000531727 CPLX4Q7Z7G2 160 aa14.07□□□□□ -0.16
CPSF1-207ENST00000531727 ZDHHC21Q8IVQ6 265 aa14.07□□□□□ -0.16
CPSF1-207ENST00000531727 OR8B3Q8NGG8 313 aa14.07□□□□□ -0.16
CPSF1-207ENST00000531727 RAB40AQ8WXH6 277 aa14.07□□□□□ -0.16
CPSF1-207ENST00000531727 DACT3Q96B18 629 aaPredicted RBP14.07□□□□□ -0.16
CPSF1-207ENST00000531727 SLCO4A1Q96BD0 722 aa14.07□□□□□ -0.16
CPSF1-207ENST00000531727 MAP6Q96JE9 813 aa14.07□□□□□ -0.16
CPSF1-207ENST00000531727 C1orf147Q96MC9 270 aaPredicted RBP14.07□□□□□ -0.16
CPSF1-207ENST00000531727 ZNF48Q96MX3 618 aaPredicted RBP14.07□□□□□ -0.16
CPSF1-207ENST00000531727 OR8B2Q96RD0 313 aa14.07□□□□□ -0.16
CPSF1-207ENST00000531727 EGLN3Q9H6Z9 239 aa14.07□□□□□ -0.16
CPSF1-207ENST00000531727 ATP8B1O43520 1251 aa14.06□□□□□ -0.16
CPSF1-207ENST00000531727 IRF2P14316 349 aa14.06□□□□□ -0.16
CPSF1-207ENST00000531727 ZNF823P16415 610 aa14.06□□□□□ -0.16
CPSF1-207ENST00000531727 CD200P41217 278 aa14.06□□□□□ -0.16
CPSF1-207ENST00000531727 RAD23AP54725 363 aa14.06□□□□□ -0.16
CPSF1-207ENST00000531727 FOXL1Q12952 345 aa14.06□□□□□ -0.16
CPSF1-207ENST00000531727 BAMBIQ13145 260 aa14.06□□□□□ -0.16
CPSF1-207ENST00000531727 CLEC12AQ5QGZ9 265 aa14.06□□□□□ -0.16
CPSF1-207ENST00000531727 RPL13AP3Q6NVV1 102 aa14.06□□□□□ -0.16
CPSF1-207ENST00000531727 PGAP1Q75T13 922 aa14.06□□□□□ -0.16
CPSF1-207ENST00000531727 NLRC3Q7RTR2 1065 aa14.06□□□□□ -0.16
CPSF1-207ENST00000531727 MRPL21Q7Z2W9 205 aaKnown RBP14.06□□□□□ -0.16
CPSF1-207ENST00000531727 PARP8Q8N3A8 854 aa14.06□□□□□ -0.16
CPSF1-207ENST00000531727 OR52L1Q8NGH7 329 aa14.06□□□□□ -0.16
CPSF1-207ENST00000531727 OR10S1Q8NGN2 331 aa14.06□□□□□ -0.16
CPSF1-207ENST00000531727 Q8TCH9 128 aa14.06□□□□□ -0.16
CPSF1-207ENST00000531727 SPTSSAQ969W0 71 aa14.06□□□□□ -0.16
CPSF1-207ENST00000531727 ERGIC1Q969X5 290 aa14.06□□□□□ -0.16
CPSF1-207ENST00000531727 UPRTQ96BW1 309 aa14.06□□□□□ -0.16
CPSF1-207ENST00000531727 DUX5Q96PT3 197 aa14.06□□□□□ -0.16
CPSF1-207ENST00000531727 MS4A7Q9GZW8 240 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-207ENST00000531727 TAGLN3Q9UI15 199 aa14.06□□□□□ -0.16
CPSF1-207ENST00000531727 CDH10Q9Y6N8 788 aa14.06□□□□□ -0.16
CPSF1-207ENST00000531727 M0R135 149 aa14.05□□□□□ -0.16
CPSF1-207ENST00000531727 BHLHE40O14503 412 aa14.05□□□□□ -0.16
CPSF1-207ENST00000531727 FAM20BO75063 409 aa14.05□□□□□ -0.16
CPSF1-207ENST00000531727 KRT36O76013 467 aa14.05□□□□□ -0.16
CPSF1-207ENST00000531727 IGHV4-38-2P0DP08 117 aa14.05□□□□□ -0.16
CPSF1-207ENST00000531727 PYCR1P32322 319 aa14.05□□□□□ -0.16
CPSF1-207ENST00000531727 PITPNBP48739 271 aa14.05□□□□□ -0.16
CPSF1-207ENST00000531727 HMGA2P52926 109 aa14.05□□□□□ -0.16
CPSF1-207ENST00000531727 SPATS1Q496A3 300 aa14.05□□□□□ -0.16
CPSF1-207ENST00000531727 DCDC5Q6ZRR9 648 aa14.05□□□□□ -0.16
CPSF1-207ENST00000531727 C9orf139Q6ZV77 190 aa14.05□□□□□ -0.16
CPSF1-207ENST00000531727 LINC00471Q8N535 108 aa14.05□□□□□ -0.16
CPSF1-207ENST00000531727 CYB561A3Q8NBI2 242 aa14.05□□□□□ -0.16
CPSF1-207ENST00000531727 PROKR2Q8NFJ6 384 aa14.05□□□□□ -0.16
CPSF1-207ENST00000531727 OR11L1Q8NGX0 322 aa14.05□□□□□ -0.16
CPSF1-207ENST00000531727 OR2T4Q8NH00 348 aa14.05□□□□□ -0.16
CPSF1-207ENST00000531727 SPRYD4Q8WW59 207 aaPredicted RBP14.05□□□□□ -0.16
CPSF1-207ENST00000531727 ZNF799Q96GE5 643 aa14.05□□□□□ -0.16
CPSF1-207ENST00000531727 DDOQ99489 341 aa14.05□□□□□ -0.16
CPSF1-207ENST00000531727 BTBD10Q9BSF8 475 aa14.05□□□□□ -0.16
CPSF1-207ENST00000531727 ZNF747Q9BV97 191 aa14.05□□□□□ -0.16
CPSF1-207ENST00000531727 ARL8BQ9NVJ2 186 aa14.05□□□□□ -0.16
CPSF1-207ENST00000531727 LYVE1Q9Y5Y7 322 aa14.05□□□□□ -0.16
CPSF1-207ENST00000531727 KIR2DS1A0A191URI9 304 aa14.04□□□□□ -0.16
CPSF1-207ENST00000531727 PLATP00750 562 aa14.04□□□□□ -0.16
CPSF1-207ENST00000531727 RNASE1P07998 156 aaKnown RBP14.04□□□□□ -0.16
CPSF1-207ENST00000531727 CA6P23280 308 aa14.04□□□□□ -0.16
CPSF1-207ENST00000531727 OTX1P32242 354 aaPredicted RBP14.04□□□□□ -0.16
CPSF1-207ENST00000531727 RPS27P42677 84 aaKnown RBP14.04□□□□□ -0.16
CPSF1-207ENST00000531727 MTNR1AP48039 350 aa14.04□□□□□ -0.16
CPSF1-207ENST00000531727 OR8G1Q15617 311 aa14.04□□□□□ -0.16
CPSF1-207ENST00000531727 PRAMEF6Q5VXH4 476 aa14.04□□□□□ -0.16
CPSF1-207ENST00000531727 C16orf89Q6UX73 402 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms