RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 FAM46AQ96IP4 442 aaKnown RBP11.93□□□□□ -0.5
CTSB-221ENST00000531502 TSSK2Q96PF2 358 aa11.93□□□□□ -0.5
CTSB-221ENST00000531502 RBM4BQ9BQ04 359 aaKnown RBP11.93□□□□□ -0.5
CTSB-221ENST00000531502 PCGF1Q9BSM1 259 aa11.93□□□□□ -0.5
CTSB-221ENST00000531502 SAR1AQ9NR31 198 aa11.93□□□□□ -0.5
CTSB-221ENST00000531502 TMEM5Q9Y2B1 443 aa11.93□□□□□ -0.5
CTSB-221ENST00000531502 IGLV1-36A0A0B4J1U3 117 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 LOC100653049A0A140TA62 436 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 SOCS2O14508 198 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 TIMM23O14925 209 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 KRT34O76011 436 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 CLPXO76031 633 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 PTBP3O95758 552 aaKnown RBP11.92□□□□□ -0.5
CTSB-221ENST00000531502 ACSM4P0C7M7 580 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 OMPP47874 163 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 PROK1P58294 105 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 IFI44LQ53G44 452 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 PRAMEF6Q5VXH4 476 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 NAA40Q86UY6 237 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 SSMEM1Q8WWF3 244 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 DYRK2Q92630 601 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 HCAR1Q9BXC0 346 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 SIRPDQ9H106 197 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 ANKRD19PQ9H560 264 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 SMURF1Q9HCE7 757 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 UFSP2Q9NUQ7 469 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 GID8Q9NWU2 228 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 RPS6KA6Q9UK32 745 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 RNF114Q9Y508 228 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 IER3IP1Q9Y5U9 82 aa11.92□□□□□ -0.5
CTSB-221ENST00000531502 TOX4O94842 621 aa11.91□□□□□ -0.5
CTSB-221ENST00000531502 PPP1R3DO95685 299 aa11.91□□□□□ -0.5
CTSB-221ENST00000531502 LIPFP07098 398 aa11.91□□□□□ -0.5
CTSB-221ENST00000531502 IRF2P14316 349 aa11.91□□□□□ -0.5
CTSB-221ENST00000531502 DBPQ10586 325 aaPredicted RBP11.91□□□□□ -0.5
CTSB-221ENST00000531502 PDCD1Q15116 288 aa11.91□□□□□ -0.5
CTSB-221ENST00000531502 CD276Q5ZPR3 534 aa11.91□□□□□ -0.5
CTSB-221ENST00000531502 PGM2L1Q6PCE3 622 aa11.91□□□□□ -0.5
CTSB-221ENST00000531502 DPY19L2P2Q6ZN68 376 aa11.91□□□□□ -0.5
CTSB-221ENST00000531502 CFAP77Q6ZQR2 320 aa11.91□□□□□ -0.5
CTSB-221ENST00000531502 HDXQ7Z353 690 aa11.91□□□□□ -0.5
CTSB-221ENST00000531502 SLC15A3Q8IY34 581 aa11.91□□□□□ -0.5
CTSB-221ENST00000531502 OR11L1Q8NGX0 322 aa11.91□□□□□ -0.5
CTSB-221ENST00000531502 GATAD2BQ8WXI9 593 aa11.91□□□□□ -0.5
CTSB-221ENST00000531502 HSH2DQ96JZ2 352 aa11.91□□□□□ -0.5
CTSB-221ENST00000531502 WDFY2Q96P53 400 aa11.91□□□□□ -0.5
CTSB-221ENST00000531502 TECTBQ96PL2 329 aa11.91□□□□□ -0.5
CTSB-221ENST00000531502 PKP2Q99959 881 aa11.91□□□□□ -0.5
CTSB-221ENST00000531502 NDEL1Q9GZM8 345 aa11.91□□□□□ -0.5
CTSB-221ENST00000531502 PNRC2Q9NPJ4 139 aaKnown RBP11.91□□□□□ -0.5
CTSB-221ENST00000531502 ACOXLQ9NUZ1 547 aa11.91□□□□□ -0.5
CTSB-221ENST00000531502 B9D1Q9UPM9 204 aa11.91□□□□□ -0.5
CTSB-221ENST00000531502 POLR1DQ9Y2S0 133 aa11.91□□□□□ -0.5
CTSB-221ENST00000531502 IGHV1-69DA0A0B4J2H0 117 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 A0A1W2PRQ8 180 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 HMGB1P1B2RPK0 211 aaPredicted RBP11.9□□□□□ -0.5
CTSB-221ENST00000531502 LGALS8O00214 317 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 CXCR6O00574 342 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 GPR137BO60478 399 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 ZNF682O95780 498 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 IGHV1-69P01742 117 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 IGHV4-59P01825 116 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 CRABP1P29762 137 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 IER3P46695 156 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 DGCR6Q14129 220 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 MAPRE2Q15555 327 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 TAF9Q16594 264 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 SFRP4Q6FHJ7 346 aaPredicted RBP11.9□□□□□ -0.5
CTSB-221ENST00000531502 SLC18B1Q6NT16 456 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 RRM2BQ7LG56 351 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.9□□□□□ -0.5
CTSB-221ENST00000531502 LDLRAD3Q86YD5 345 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 OR6V1Q8N148 313 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 SLC26A10Q8NG04 563 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 TBC1D15Q8TC07 691 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 SLCO4A1Q96BD0 722 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 RSRC1Q96IZ7 334 aaKnown RBP11.9□□□□□ -0.5
CTSB-221ENST00000531502 MRGBPQ9NV56 204 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 ERVK-18Q9QC07 812 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 RNF7Q9UBF6 113 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 ENPP4Q9Y6X5 453 aa11.9□□□□□ -0.5
CTSB-221ENST00000531502 A0A0U1RQK1 487 aa11.89□□□□□ -0.51
CTSB-221ENST00000531502 SLC22A31A6NKX4 558 aa11.89□□□□□ -0.51
CTSB-221ENST00000531502 F5H5K5 113 aa11.89□□□□□ -0.51
CTSB-221ENST00000531502 TSPAN15O95858 294 aa11.89□□□□□ -0.51
CTSB-221ENST00000531502 ANOS1P23352 680 aa11.89□□□□□ -0.51
CTSB-221ENST00000531502 MDH1P40925 334 aaKnown RBP11.89□□□□□ -0.51
CTSB-221ENST00000531502 RPS6KA3P51812 740 aa11.89□□□□□ -0.51
CTSB-221ENST00000531502 LIPEQ05469 1076 aa11.89□□□□□ -0.51
CTSB-221ENST00000531502 SEC23BQ15437 767 aa11.89□□□□□ -0.51
CTSB-221ENST00000531502 CGB2Q6NT52 195 aa11.89□□□□□ -0.51
CTSB-221ENST00000531502 LINC00346Q8IVM7 164 aa11.89□□□□□ -0.51
CTSB-221ENST00000531502 RCN3Q96D15 328 aa11.89□□□□□ -0.51
CTSB-221ENST00000531502 ATF6BQ99941 703 aa11.89□□□□□ -0.51
CTSB-221ENST00000531502 TRIM15Q9C019 465 aa11.89□□□□□ -0.51
CTSB-221ENST00000531502 RASSF4Q9H2L5 321 aa11.89□□□□□ -0.51
CTSB-221ENST00000531502 MMADHCQ9H3L0 296 aaPredicted RBP11.89□□□□□ -0.51
CTSB-221ENST00000531502 SRA1Q9HD15 236 aaKnown RBP11.89□□□□□ -0.51
CTSB-221ENST00000531502 ZNF446Q9NWS9 450 aa11.89□□□□□ -0.51
CTSB-221ENST00000531502 CYB5R1Q9UHQ9 305 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms