RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 ATF6BQ99941 703 aa18.71■□□□□ 0.59
TRAPPC4-210ENST00000531290 CYB5R1Q9UHQ9 305 aa18.71■□□□□ 0.59
TRAPPC4-210ENST00000531290 IGHV3-64DA0A0J9YX35 117 aa18.7■□□□□ 0.58
TRAPPC4-210ENST00000531290 A8MXK9 166 aa18.7■□□□□ 0.58
TRAPPC4-210ENST00000531290 F5H5P2 479 aa18.7■□□□□ 0.58
TRAPPC4-210ENST00000531290 KRT36O76013 467 aa18.7■□□□□ 0.58
TRAPPC4-210ENST00000531290 ZNF205O95201 554 aa18.7■□□□□ 0.58
TRAPPC4-210ENST00000531290 WNT2P09544 360 aa18.7■□□□□ 0.58
TRAPPC4-210ENST00000531290 ACSM4P0C7M7 580 aa18.7■□□□□ 0.58
TRAPPC4-210ENST00000531290 ZNF823P16415 610 aa18.7■□□□□ 0.58
TRAPPC4-210ENST00000531290 ATP6V1B2P21281 511 aa18.7■□□□□ 0.58
TRAPPC4-210ENST00000531290 KRTAP27-1Q3LI81 207 aa18.7■□□□□ 0.58
TRAPPC4-210ENST00000531290 LCN8Q6JVE9 175 aa18.7■□□□□ 0.58
TRAPPC4-210ENST00000531290 MOGAT3Q86VF5 341 aa18.7■□□□□ 0.58
TRAPPC4-210ENST00000531290 C1orf87Q8N0U7 546 aa18.7■□□□□ 0.58
TRAPPC4-210ENST00000531290 ZDHHC22Q8N966 263 aa18.7■□□□□ 0.58
TRAPPC4-210ENST00000531290 CCDC124Q96CT7 223 aaKnown RBP18.7■□□□□ 0.58
TRAPPC4-210ENST00000531290 ASB9Q96DX5 294 aa18.7■□□□□ 0.58
TRAPPC4-210ENST00000531290 FN3KQ9H479 309 aa18.7■□□□□ 0.58
TRAPPC4-210ENST00000531290 TMEM165Q9HC07 324 aa18.7■□□□□ 0.58
TRAPPC4-210ENST00000531290 ESM1Q9NQ30 184 aa18.7■□□□□ 0.58
TRAPPC4-210ENST00000531290 MIOXQ9UGB7 285 aa18.7■□□□□ 0.58
TRAPPC4-210ENST00000531290 LRCH1Q9Y2L9 728 aa18.7■□□□□ 0.58
TRAPPC4-210ENST00000531290 MLNRO43193 412 aa18.69■□□□□ 0.58
TRAPPC4-210ENST00000531290 IRF2P14316 349 aa18.69■□□□□ 0.58
TRAPPC4-210ENST00000531290 RPS2P15880 293 aaKnown RBP18.69■□□□□ 0.58
TRAPPC4-210ENST00000531290 GGT2P36268 569 aa18.69■□□□□ 0.58
TRAPPC4-210ENST00000531290 TPTEP56180 551 aa18.69■□□□□ 0.58
TRAPPC4-210ENST00000531290 UBA52P62987 128 aaKnown RBP18.69■□□□□ 0.58
TRAPPC4-210ENST00000531290 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.69■□□□□ 0.58
TRAPPC4-210ENST00000531290 TRAP1Q12931 704 aaKnown RBP18.69■□□□□ 0.58
TRAPPC4-210ENST00000531290 CLEC12AQ5QGZ9 265 aa18.69■□□□□ 0.58
TRAPPC4-210ENST00000531290 PGBD2Q6P3X8 592 aa18.69■□□□□ 0.58
TRAPPC4-210ENST00000531290 ZNF620Q6ZNG0 422 aa18.69■□□□□ 0.58
TRAPPC4-210ENST00000531290 SIGLECL1Q8N7X8 197 aa18.69■□□□□ 0.58
TRAPPC4-210ENST00000531290 OR52L1Q8NGH7 329 aa18.69■□□□□ 0.58
TRAPPC4-210ENST00000531290 SLCO4A1Q96BD0 722 aa18.69■□□□□ 0.58
TRAPPC4-210ENST00000531290 PLEKHA8Q96JA3 519 aa18.69■□□□□ 0.58
TRAPPC4-210ENST00000531290 SSBP3Q9BWW4 388 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC4-210ENST00000531290 PLA2G12AQ9BZM1 189 aa18.69■□□□□ 0.58
TRAPPC4-210ENST00000531290 MAGIXQ9H6Y5 334 aa18.69■□□□□ 0.58
TRAPPC4-210ENST00000531290 KCNG2Q9UJ96 466 aa18.69■□□□□ 0.58
TRAPPC4-210ENST00000531290 PPIAL4AQ9Y536 164 aa18.69■□□□□ 0.58
TRAPPC4-210ENST00000531290 HLA-DPB1P04440 258 aa18.68■□□□□ 0.58
TRAPPC4-210ENST00000531290 GK2Q14410 553 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC4-210ENST00000531290 ZNF181Q2M3W8 571 aa18.68■□□□□ 0.58
TRAPPC4-210ENST00000531290 RPL13AP3Q6NVV1 102 aa18.68■□□□□ 0.58
TRAPPC4-210ENST00000531290 BTNL3Q6UXE8 466 aa18.68■□□□□ 0.58
TRAPPC4-210ENST00000531290 PGAP1Q75T13 922 aa18.68■□□□□ 0.58
TRAPPC4-210ENST00000531290 NAA40Q86UY6 237 aa18.68■□□□□ 0.58
TRAPPC4-210ENST00000531290 LINC00471Q8N535 108 aa18.68■□□□□ 0.58
TRAPPC4-210ENST00000531290 SPRYD4Q8WW59 207 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC4-210ENST00000531290 SPTSSAQ969W0 71 aa18.68■□□□□ 0.58
TRAPPC4-210ENST00000531290 ZMYND19Q96E35 227 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC4-210ENST00000531290 ZNF69Q9UC07 566 aa18.68■□□□□ 0.58
TRAPPC4-210ENST00000531290 TNFRSF11BO00300 401 aa18.67■□□□□ 0.58
TRAPPC4-210ENST00000531290 PRSS12P56730 875 aa18.67■□□□□ 0.58
TRAPPC4-210ENST00000531290 GNB2P62879 340 aa18.67■□□□□ 0.58
TRAPPC4-210ENST00000531290 MS4A2Q01362 244 aa18.67■□□□□ 0.58
TRAPPC4-210ENST00000531290 PAX8Q06710 450 aa18.67■□□□□ 0.58
TRAPPC4-210ENST00000531290 MRPL21Q7Z2W9 205 aaKnown RBP18.67■□□□□ 0.58
TRAPPC4-210ENST00000531290 KLBQ86Z14 1044 aa18.67■□□□□ 0.58
TRAPPC4-210ENST00000531290 PROKR2Q8NFJ6 384 aa18.67■□□□□ 0.58
TRAPPC4-210ENST00000531290 OR11L1Q8NGX0 322 aa18.67■□□□□ 0.58
TRAPPC4-210ENST00000531290 OR2T4Q8NH00 348 aa18.67■□□□□ 0.58
TRAPPC4-210ENST00000531290 NEIL1Q96FI4 390 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC4-210ENST00000531290 CLPTM1LQ96KA5 538 aa18.67■□□□□ 0.58
TRAPPC4-210ENST00000531290 TMEM246Q9BRR3 403 aa18.67■□□□□ 0.58
TRAPPC4-210ENST00000531290 BTBD10Q9BSF8 475 aa18.67■□□□□ 0.58
TRAPPC4-210ENST00000531290 EGLN3Q9H6Z9 239 aa18.67■□□□□ 0.58
TRAPPC4-210ENST00000531290 PNRC2Q9NPJ4 139 aaKnown RBP18.67■□□□□ 0.58
TRAPPC4-210ENST00000531290 MRPL22Q9NWU5 206 aaKnown RBP18.67■□□□□ 0.58
TRAPPC4-210ENST00000531290 CDH10Q9Y6N8 788 aa18.67■□□□□ 0.58
TRAPPC4-210ENST00000531290 A0A1B0GWJ7 208 aa18.66■□□□□ 0.58
TRAPPC4-210ENST00000531290 FSTL3O95633 263 aa18.66■□□□□ 0.58
TRAPPC4-210ENST00000531290 PYCR1P32322 319 aa18.66■□□□□ 0.58
TRAPPC4-210ENST00000531290 CD80P33681 288 aa18.66■□□□□ 0.58
TRAPPC4-210ENST00000531290 RASSF2P50749 326 aa18.66■□□□□ 0.58
TRAPPC4-210ENST00000531290 HMGA2P52926 109 aa18.66■□□□□ 0.58
TRAPPC4-210ENST00000531290 RAD23AP54725 363 aa18.66■□□□□ 0.58
TRAPPC4-210ENST00000531290 KLF17Q5JT82 389 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC4-210ENST00000531290 LRRN1Q6UXK5 716 aa18.66■□□□□ 0.58
TRAPPC4-210ENST00000531290 DOK3Q7L591 496 aa18.66■□□□□ 0.58
TRAPPC4-210ENST00000531290 NLRC3Q7RTR2 1065 aa18.66■□□□□ 0.58
TRAPPC4-210ENST00000531290 CELF2-AS1Q8N7Q2 184 aa18.66■□□□□ 0.58
TRAPPC4-210ENST00000531290 ERGIC1Q969X5 290 aa18.66■□□□□ 0.58
TRAPPC4-210ENST00000531290 MAP6Q96JE9 813 aa18.66■□□□□ 0.58
TRAPPC4-210ENST00000531290 MS4A7Q9GZW8 240 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC4-210ENST00000531290 NOP16Q9Y3C1 178 aaKnown RBP18.66■□□□□ 0.58
TRAPPC4-210ENST00000531290 TCRBV5S2A0A599 114 aa18.65■□□□□ 0.58
TRAPPC4-210ENST00000531290 M0R135 149 aa18.65■□□□□ 0.58
TRAPPC4-210ENST00000531290 PMELP40967 661 aa18.65■□□□□ 0.58
TRAPPC4-210ENST00000531290 GATA4P43694 442 aa18.65■□□□□ 0.58
TRAPPC4-210ENST00000531290 ZNF404Q494X3 552 aa18.65■□□□□ 0.58
TRAPPC4-210ENST00000531290 CYB561A3Q8NBI2 242 aa18.65■□□□□ 0.58
TRAPPC4-210ENST00000531290 OR8B3Q8NGG8 313 aa18.65■□□□□ 0.58
TRAPPC4-210ENST00000531290 RAB40AQ8WXH6 277 aa18.65■□□□□ 0.58
TRAPPC4-210ENST00000531290 ZNF799Q96GE5 643 aa18.65■□□□□ 0.58
TRAPPC4-210ENST00000531290 OR8B2Q96RD0 313 aa18.65■□□□□ 0.58
TRAPPC4-210ENST00000531290 SLC22A4Q9H015 551 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms