RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 COG8Q96MW5 612 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 ZNF582Q96NG8 517 aaPredicted RBP6.66□□□□□ -1.34
CD44-232ENST00000531118 DDOQ99489 341 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 ASCL2Q99929 193 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 DCTN5Q9BTE1 182 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 CHID1Q9BWS9 393 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 NANSQ9NR45 359 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 INPP5EQ9NRR6 644 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 UFSP2Q9NUQ7 469 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 SLAMF8Q9P0V8 285 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 DUX4Q9UBX2 424 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 TIMM10BQ9Y5J6 103 aa6.66□□□□□ -1.34
CD44-232ENST00000531118 ABCA13Q86UQ4 5058 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 A0A1B0GWJ7 208 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 A0A1W2PPL8 197 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 WDR91A4D1P6 747 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 ANKRD34BA5PLL1 514 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 OOEPA6NGQ2 149 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 H0YHG0 523 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 RFXANKO14593 260 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 CHP2O43745 196 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 ANGPTL7O43827 346 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 TPST2O60704 377 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 GYPAP02724 150 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 HLA-DPB1P04440 258 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 UMPSP11172 480 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 NR2C1P13056 603 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 ZNF26P17031 533 aaPredicted RBP6.65□□□□□ -1.34
CD44-232ENST00000531118 FPR3P25089 353 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 GDNFP39905 211 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 RPL18Q07020 188 aaKnown RBP6.65□□□□□ -1.34
CD44-232ENST00000531118 LRRC74AQ0VAA2 488 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 MAB21L1Q13394 359 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 OR8B8Q15620 311 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 NXNQ6DKJ4 435 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 ZFAND6Q6FIF0 208 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 SLC25A47Q6Q0C1 308 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 ADAMTSL5Q6ZMM2 481 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 Q8N7P7 452 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 CELF2-AS1Q8N7Q2 184 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 LINC00482Q8N8I6 264 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 BOLLQ8N9W6 283 aaKnown RBP6.65□□□□□ -1.34
CD44-232ENST00000531118 LY6G5BQ8NDX9 201 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 SDR9C7Q8NEX9 313 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 IFT81Q8WYA0 676 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 SLC7A6Q92536 515 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 PTP4A1Q93096 173 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 OR52E6Q96RD3 313 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 WFDC6Q9BQY6 131 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 FAM234AQ9H0X4 552 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 TPT1P8Q9HAU6 139 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 TRIM36Q9NQ86 728 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 THUMPD1Q9NXG2 353 aaKnown RBP6.65□□□□□ -1.34
CD44-232ENST00000531118 SLC17A7Q9P2U7 560 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 STX18Q9P2W9 335 aaKnown RBP6.65□□□□□ -1.34
CD44-232ENST00000531118 RNF7Q9UBF6 113 aa6.65□□□□□ -1.34
CD44-232ENST00000531118 SF3B6Q9Y3B4 125 aaKnown RBP6.65□□□□□ -1.34
CD44-232ENST00000531118 TRAV38-1A0A0B4J264 116 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 C5orf58C9J3I9 102 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 SGCEO43556 437 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 NDUFA2O43678 99 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 TPST1O60507 370 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 FMO6PO60774 539 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 PEX14O75381 377 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 CLIC3O95833 236 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 ALDOCP09972 364 aaKnown RBP6.64□□□□□ -1.35
CD44-232ENST00000531118 CCDC159P0C7I6 412 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 ETS2P15036 469 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 JUNBP17275 347 aaPredicted RBP6.64□□□□□ -1.35
CD44-232ENST00000531118 KRT4P19013 534 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 MSR1P21757 451 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 BGNP21810 368 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 PAX6P26367 422 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 UBE2E1P51965 193 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 UFM1P61960 85 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 CD83Q01151 205 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 ACSM1Q08AH1 577 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 SCRN3Q0VDG4 424 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 MPPED2Q15777 294 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 AANATQ16613 207 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 BEND6Q5SZJ8 279 aaPredicted RBP6.64□□□□□ -1.35
CD44-232ENST00000531118 ARMC4Q5T2S8 1044 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 NCR3LG1Q68D85 454 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 TRMT10CQ7L0Y3 403 aaKnown RBP6.64□□□□□ -1.35
CD44-232ENST00000531118 FAM90A1Q86YD7 464 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 SLC30A8Q8IWU4 369 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 IFT20Q8IY31 132 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 C10orf111Q8N326 155 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 AENQ8WTP8 325 aaKnown RBP6.64□□□□□ -1.35
CD44-232ENST00000531118 RASD2Q96D21 266 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 AJUBAQ96IF1 538 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 APOPT1Q96IL0 206 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 MAELQ96JY0 434 aaKnown RBP6.64□□□□□ -1.35
CD44-232ENST00000531118 RCHY1Q96PM5 261 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 OR5M11Q96RB7 305 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 CPPED1Q9BRF8 314 aaPredicted RBP6.64□□□□□ -1.35
CD44-232ENST00000531118 ALG12Q9BV10 488 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 CDCA4Q9BXL8 241 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 MUC13Q9H3R2 512 aa6.64□□□□□ -1.35
CD44-232ENST00000531118 INIPQ9NRY2 104 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms