RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 GATA4P43694 442 aa13.21□□□□□ -0.29
CPSF1-205ENST00000531042 PRSS12P56730 875 aa13.21□□□□□ -0.29
CPSF1-205ENST00000531042 TRAP1Q12931 704 aaKnown RBP13.21□□□□□ -0.29
CPSF1-205ENST00000531042 TSPAN31Q12999 210 aa13.21□□□□□ -0.29
CPSF1-205ENST00000531042 ZNF404Q494X3 552 aa13.21□□□□□ -0.29
CPSF1-205ENST00000531042 SAMD4BQ5PRF9 694 aaKnown RBP13.21□□□□□ -0.29
CPSF1-205ENST00000531042 SLC35F1Q5T1Q4 408 aa13.21□□□□□ -0.29
CPSF1-205ENST00000531042 ZNF620Q6ZNG0 422 aa13.21□□□□□ -0.29
CPSF1-205ENST00000531042 BCL6BQ8N143 479 aaPredicted RBP13.21□□□□□ -0.29
CPSF1-205ENST00000531042 OR52E2Q8NGJ4 325 aa13.21□□□□□ -0.29
CPSF1-205ENST00000531042 SGMS2Q8NHU3 365 aa13.21□□□□□ -0.29
CPSF1-205ENST00000531042 GNPDA2Q8TDQ7 276 aa13.21□□□□□ -0.29
CPSF1-205ENST00000531042 CDRT15Q96T59 188 aa13.21□□□□□ -0.29
CPSF1-205ENST00000531042 MRPL22Q9NWU5 206 aaKnown RBP13.21□□□□□ -0.29
CPSF1-205ENST00000531042 DNAJC9-AS1A6NH13 148 aa13.2□□□□□ -0.3
CPSF1-205ENST00000531042 SPRY1O43609 319 aaPredicted RBP13.2□□□□□ -0.3
CPSF1-205ENST00000531042 LCATP04180 440 aa13.2□□□□□ -0.3
CPSF1-205ENST00000531042 PPIAL4GP0DN37 164 aa13.2□□□□□ -0.3
CPSF1-205ENST00000531042 HKR1P10072 659 aa13.2□□□□□ -0.3
CPSF1-205ENST00000531042 PRTN3P24158 256 aa13.2□□□□□ -0.3
CPSF1-205ENST00000531042 GNB2P62879 340 aa13.2□□□□□ -0.3
CPSF1-205ENST00000531042 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.2□□□□□ -0.3
CPSF1-205ENST00000531042 MALLQ13021 153 aa13.2□□□□□ -0.3
CPSF1-205ENST00000531042 MAB21L1Q13394 359 aa13.2□□□□□ -0.3
CPSF1-205ENST00000531042 FAM201AQ5SY85 155 aa13.2□□□□□ -0.3
CPSF1-205ENST00000531042 PGBD2Q6P3X8 592 aa13.2□□□□□ -0.3
CPSF1-205ENST00000531042 LRRN1Q6UXK5 716 aa13.2□□□□□ -0.3
CPSF1-205ENST00000531042 ZDHHC21Q8IVQ6 265 aa13.2□□□□□ -0.3
CPSF1-205ENST00000531042 C1orf87Q8N0U7 546 aa13.2□□□□□ -0.3
CPSF1-205ENST00000531042 CELF2-AS1Q8N7Q2 184 aa13.2□□□□□ -0.3
CPSF1-205ENST00000531042 DACT3Q96B18 629 aaPredicted RBP13.2□□□□□ -0.3
CPSF1-205ENST00000531042 SLCO4A1Q96BD0 722 aa13.2□□□□□ -0.3
CPSF1-205ENST00000531042 NEIL1Q96FI4 390 aaPredicted RBP13.2□□□□□ -0.3
CPSF1-205ENST00000531042 PLEKHA8Q96JA3 519 aa13.2□□□□□ -0.3
CPSF1-205ENST00000531042 MAP6Q96JE9 813 aa13.2□□□□□ -0.3
CPSF1-205ENST00000531042 C1orf147Q96MC9 270 aaPredicted RBP13.2□□□□□ -0.3
CPSF1-205ENST00000531042 ZNF48Q96MX3 618 aaPredicted RBP13.2□□□□□ -0.3
CPSF1-205ENST00000531042 NSRP1Q9H0G5 558 aaKnown RBP13.2□□□□□ -0.3
CPSF1-205ENST00000531042 EGLN3Q9H6Z9 239 aa13.2□□□□□ -0.3
CPSF1-205ENST00000531042 KCNG2Q9UJ96 466 aa13.2□□□□□ -0.3
CPSF1-205ENST00000531042 DOCK11Q5JSL3 2073 aa13.2□□□□□ -0.3
CPSF1-205ENST00000531042 PKD1L1Q8TDX9 2849 aa13.19□□□□□ -0.3
CPSF1-205ENST00000531042 IGHV2-70DA0A0C4DH43 119 aa13.19□□□□□ -0.3
CPSF1-205ENST00000531042 ZNF823P16415 610 aa13.19□□□□□ -0.3
CPSF1-205ENST00000531042 CD200P41217 278 aa13.19□□□□□ -0.3
CPSF1-205ENST00000531042 HMGA2P52926 109 aa13.19□□□□□ -0.3
CPSF1-205ENST00000531042 TPTEP56180 551 aa13.19□□□□□ -0.3
CPSF1-205ENST00000531042 FOXL1Q12952 345 aa13.19□□□□□ -0.3
CPSF1-205ENST00000531042 BAMBIQ13145 260 aa13.19□□□□□ -0.3
CPSF1-205ENST00000531042 BTNL3Q6UXE8 466 aa13.19□□□□□ -0.3
CPSF1-205ENST00000531042 PGAP1Q75T13 922 aa13.19□□□□□ -0.3
CPSF1-205ENST00000531042 CPLX4Q7Z7G2 160 aa13.19□□□□□ -0.3
CPSF1-205ENST00000531042 OR8B3Q8NGG8 313 aa13.19□□□□□ -0.3
CPSF1-205ENST00000531042 OR10S1Q8NGN2 331 aa13.19□□□□□ -0.3
CPSF1-205ENST00000531042 Q8TCH9 128 aa13.19□□□□□ -0.3
CPSF1-205ENST00000531042 RAB40AQ8WXH6 277 aa13.19□□□□□ -0.3
CPSF1-205ENST00000531042 ERGIC1Q969X5 290 aa13.19□□□□□ -0.3
CPSF1-205ENST00000531042 DUX5Q96PT3 197 aa13.19□□□□□ -0.3
CPSF1-205ENST00000531042 OR8B2Q96RD0 313 aa13.19□□□□□ -0.3
CPSF1-205ENST00000531042 DDOQ99489 341 aa13.19□□□□□ -0.3
CPSF1-205ENST00000531042 MS4A7Q9GZW8 240 aaPredicted RBP13.19□□□□□ -0.3
CPSF1-205ENST00000531042 ZMAT3Q9HA38 289 aaKnown RBP13.19□□□□□ -0.3
CPSF1-205ENST00000531042 FAM53CQ9NYF3 392 aa13.19□□□□□ -0.3
CPSF1-205ENST00000531042 TAGLN3Q9UI15 199 aa13.19□□□□□ -0.3
CPSF1-205ENST00000531042 M0R135 149 aa13.18□□□□□ -0.3
CPSF1-205ENST00000531042 BHLHE40O14503 412 aa13.18□□□□□ -0.3
CPSF1-205ENST00000531042 KRT36O76013 467 aa13.18□□□□□ -0.3
CPSF1-205ENST00000531042 IGHV4-38-2P0DP08 117 aa13.18□□□□□ -0.3
CPSF1-205ENST00000531042 IRF2P14316 349 aa13.18□□□□□ -0.3
CPSF1-205ENST00000531042 PYCR1P32322 319 aa13.18□□□□□ -0.3
CPSF1-205ENST00000531042 RAD23AP54725 363 aa13.18□□□□□ -0.3
CPSF1-205ENST00000531042 CLEC12AQ5QGZ9 265 aa13.18□□□□□ -0.3
CPSF1-205ENST00000531042 RPL13AP3Q6NVV1 102 aa13.18□□□□□ -0.3
CPSF1-205ENST00000531042 C9orf139Q6ZV77 190 aa13.18□□□□□ -0.3
CPSF1-205ENST00000531042 NLRC3Q7RTR2 1065 aa13.18□□□□□ -0.3
CPSF1-205ENST00000531042 MRPL21Q7Z2W9 205 aaKnown RBP13.18□□□□□ -0.3
CPSF1-205ENST00000531042 PARP8Q8N3A8 854 aa13.18□□□□□ -0.3
CPSF1-205ENST00000531042 CYB561A3Q8NBI2 242 aa13.18□□□□□ -0.3
CPSF1-205ENST00000531042 OR52L1Q8NGH7 329 aa13.18□□□□□ -0.3
CPSF1-205ENST00000531042 SPRYD4Q8WW59 207 aaPredicted RBP13.18□□□□□ -0.3
CPSF1-205ENST00000531042 SPTSSAQ969W0 71 aa13.18□□□□□ -0.3
CPSF1-205ENST00000531042 UPRTQ96BW1 309 aa13.18□□□□□ -0.3
CPSF1-205ENST00000531042 ZNF799Q96GE5 643 aa13.18□□□□□ -0.3
CPSF1-205ENST00000531042 ARL8BQ9NVJ2 186 aa13.18□□□□□ -0.3
CPSF1-205ENST00000531042 LYVE1Q9Y5Y7 322 aa13.18□□□□□ -0.3
CPSF1-205ENST00000531042 CDH10Q9Y6N8 788 aa13.18□□□□□ -0.3
CPSF1-205ENST00000531042 IGHV3OR16-10A0A075B7F0 116 aa13.17□□□□□ -0.3
CPSF1-205ENST00000531042 KIR2DS1A0A191URI9 304 aa13.17□□□□□ -0.3
CPSF1-205ENST00000531042 FAM20BO75063 409 aa13.17□□□□□ -0.3
CPSF1-205ENST00000531042 PLATP00750 562 aa13.17□□□□□ -0.3
CPSF1-205ENST00000531042 RPS27P42677 84 aaKnown RBP13.17□□□□□ -0.3
CPSF1-205ENST00000531042 PITPNBP48739 271 aa13.17□□□□□ -0.3
CPSF1-205ENST00000531042 MPPED2Q15777 294 aa13.17□□□□□ -0.3
CPSF1-205ENST00000531042 SPATS1Q496A3 300 aa13.17□□□□□ -0.3
CPSF1-205ENST00000531042 ZNF362Q5T0B9 420 aaPredicted RBP13.17□□□□□ -0.3
CPSF1-205ENST00000531042 PRAMEF6Q5VXH4 476 aa13.17□□□□□ -0.3
CPSF1-205ENST00000531042 LYPD2Q6UXB3 125 aa13.17□□□□□ -0.3
CPSF1-205ENST00000531042 DCDC5Q6ZRR9 648 aa13.17□□□□□ -0.3
CPSF1-205ENST00000531042 DEFB107AQ8IZN7 70 aa13.17□□□□□ -0.3
CPSF1-205ENST00000531042 PROKR2Q8NFJ6 384 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms