RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 RNF7Q9UBF6 113 aa7.43□□□□□ -1.22
VPS11-203ENST00000529545 GRHPRQ9UBQ7 328 aa7.43□□□□□ -1.22
VPS11-203ENST00000529545 ATPIF1Q9UII2 106 aa7.43□□□□□ -1.22
VPS11-203ENST00000529545 POLR1DQ9Y2S0 133 aa7.43□□□□□ -1.22
VPS11-203ENST00000529545 NDUFAF1Q9Y375 327 aa7.43□□□□□ -1.22
VPS11-203ENST00000529545 NOP16Q9Y3C1 178 aaKnown RBP7.43□□□□□ -1.22
VPS11-203ENST00000529545 PLXNB1O43157 2135 aa7.43□□□□□ -1.22
VPS11-203ENST00000529545 A0A1B0GVI7 797 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 H7C1C5 153 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 LGALS8O00214 317 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 PAHP00439 452 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 IFNA14P01570 189 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 SCG5P05408 212 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 LSM6P62312 80 aaKnown RBP7.42□□□□□ -1.22
VPS11-203ENST00000529545 LCN6P62502 163 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 ST3GAL3Q11203 375 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 COX10Q12887 443 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 TNFAIP8L3Q5GJ75 292 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 NKAPLQ5M9Q1 402 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 SFRP4Q6FHJ7 346 aaPredicted RBP7.42□□□□□ -1.22
VPS11-203ENST00000529545 SLC35E4Q6ICL7 350 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 C11orf88Q6PI97 169 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 OAFQ86UD1 273 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 GLB1L2Q8IW92 636 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 CMTM4Q8IZR5 234 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 OR51A7Q8NH64 312 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 OR5R1Q8NH85 324 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 LRRC8CQ8TDW0 803 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 SPRYD4Q8WW59 207 aaPredicted RBP7.42□□□□□ -1.22
VPS11-203ENST00000529545 ZBTB9Q96C00 473 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 CGREF1Q99674 301 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 ECSITQ9BQ95 431 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 CCDC28BQ9BUN5 200 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 SLC22A4Q9H015 551 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 RASSF4Q9H2L5 321 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 RERGLQ9H628 205 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 KAT8Q9H7Z6 458 aaKnown RBP7.42□□□□□ -1.22
VPS11-203ENST00000529545 CNTD2Q9H8S5 307 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 NECAP2Q9NVZ3 263 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 CTSZQ9UBR2 303 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 FBLN5Q9UBX5 448 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 KPTNQ9Y664 436 aa7.42□□□□□ -1.22
VPS11-203ENST00000529545 TRAV27A0A087WT01 109 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 TEX13CA0A0J9YWL9 993 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 EFCAB9A8MZ26 197 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 RNASEK-C17orf49H0YIS7 233 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 SHOX2O60902 331 aaPredicted RBP7.41□□□□□ -1.22
VPS11-203ENST00000529545 KHDRBS3O75525 346 aaKnown RBP7.41□□□□□ -1.22
VPS11-203ENST00000529545 DBHP09172 617 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 TNFRSF1BP20333 461 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 CD200P41217 278 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 SLC9A3P48764 834 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 SLC18A1P54219 525 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 MALLQ13021 153 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 MAB21L1Q13394 359 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 NFYCQ13952 458 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 SELPLGQ14242 412 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 OR8G1Q15617 311 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 VMACQ2NL98 169 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 CDONQ4KMG0 1287 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 CCDC92Q53HC0 331 aaPredicted RBP7.41□□□□□ -1.22
VPS11-203ENST00000529545 CLEC12AQ5QGZ9 265 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 BEND6Q5SZJ8 279 aaPredicted RBP7.41□□□□□ -1.22
VPS11-203ENST00000529545 PRAMEF6Q5VXH4 476 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 WDR93Q6P2C0 686 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 CCDC80Q76M96 950 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 BTN2A1Q7KYR7 527 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 VMO1Q7Z5L0 202 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 MICU2Q8IYU8 434 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 DPP10Q8N608 796 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 DTX3Q8N9I9 347 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 LRRC75AQ8NAA5 344 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 GJC3Q8NFK1 279 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 OR4S1Q8NGB4 309 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 OR10A6Q8NH74 314 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 LZICQ8WZA0 190 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 ZNF570Q96NI8 536 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 COQ7Q99807 217 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 HDHD2Q9H0R4 259 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 PPA2Q9H2U2 334 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 WDR76Q9H967 626 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 ZNRD1Q9P1U0 126 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 ONECUT1Q9UBC0 465 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 AURKCQ9UQB9 309 aa7.41□□□□□ -1.22
VPS11-203ENST00000529545 A0A1B0GWJ7 208 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 PRSS37A4D1T9 235 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 OOEPA6NGQ2 149 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 DVL1O14640 695 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 RER1O15258 196 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 OR10H3O60404 316 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 SLC16A7O60669 478 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 CD14P08571 375 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 H2AFB1P0C5Y9 115 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 H2AFB2P0C5Z0 115 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 CTLA4P16410 223 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 OR1E2P47887 323 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 CENPAP49450 140 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 MPPED2Q15777 294 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 PGM2L1Q6PCE3 622 aa7.4□□□□□ -1.22
VPS11-203ENST00000529545 PGAP1Q75T13 922 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms