RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 PTTG3PQ9NZH4 202 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 LUZP4Q9P127 313 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 ING4Q9UNL4 249 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 SLC22A13Q9Y226 551 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 EMC9Q9Y3B6 208 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 KLF2Q9Y5W3 355 aaPredicted RBP10.42□□□□□ -0.74
USF1-208ENST00000528768 EXPH5Q8NEV8 1989 aa10.42□□□□□ -0.74
USF1-208ENST00000528768 MED13LQ71F56 2210 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 TRAV8-7A0A075B6U6 113 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 A0A1B0GVI7 797 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 SHISA8B8ZZ34 492 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 ZNF878C9JN71 531 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 NPIPA2E9PIF3 369 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 NPIPA3F8WFD2 350 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 SULT1C2O00338 296 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 EFNA2O43921 213 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 ATP6V1G1O75348 118 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 SCGNO76038 276 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 GLSO94925 669 aaPredicted RBP10.41□□□□□ -0.74
USF1-208ENST00000528768 MPZL1O95297 269 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 PNPP00491 289 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 APOC1P02654 83 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 CSF1P09603 554 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 PGA4P0DJD7 388 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 PGA3P0DJD8 388 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 ADRA2CP18825 462 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 CDK2P24941 298 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 GIFP27352 417 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 OTX2P32243 289 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 SFTPDP35247 375 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 CLDN12P56749 244 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 CD83Q01151 205 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 FMODQ06828 376 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 RIPPLY1Q0D2K3 151 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 CAMK2DQ13557 499 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 FAM189A2Q15884 450 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 PLEKHN1Q494U1 663 aaPredicted RBP10.41□□□□□ -0.74
USF1-208ENST00000528768 RAET1LQ5VY80 246 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 CD276Q5ZPR3 534 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 ANKRD16Q6P6B7 361 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 SLC25A47Q6Q0C1 308 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 IGFL3Q6UXB1 125 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 ADAMTS17Q8TE56 1095 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 ASB5Q8WWX0 329 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 DACT3Q96B18 629 aaPredicted RBP10.41□□□□□ -0.74
USF1-208ENST00000528768 FAM3DQ96BQ1 224 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 ORAI1Q96D31 301 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 DMRTB1Q96MA1 342 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 IP6K3Q96PC2 410 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 NPAS1Q99742 590 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 EMC6Q9BV81 110 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 NUDT15Q9NV35 164 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 ABI3Q9P2A4 366 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 B3GAT1Q9P2W7 334 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 CYB5R1Q9UHQ9 305 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 POU2F3Q9UKI9 436 aa10.41□□□□□ -0.74
USF1-208ENST00000528768 NAV3Q8IVL0 2385 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 LOC107986453A0A1B0GWG9 222 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 A0A1W2PNR3 127 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 C7orf66A4D0T2 115 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 METTL21EPA6NDL7 271 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 TRAF3IP2O43734 574 aaPredicted RBP10.4□□□□□ -0.74
USF1-208ENST00000528768 SRSF10O75494 262 aaKnown RBP10.4□□□□□ -0.74
USF1-208ENST00000528768 SNAPC5O75971 98 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 C1QBP02746 253 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 SERPINA7P05543 415 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 PSMB1P20618 241 aaKnown RBP10.4□□□□□ -0.74
USF1-208ENST00000528768 TCEA1P23193 301 aaKnown RBP10.4□□□□□ -0.74
USF1-208ENST00000528768 HTR2CP28335 458 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 SRD5A2P31213 254 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 MAGEB1P43366 347 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 CSNK1A1P48729 337 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 PTH2RP49190 550 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 SRP9P49458 86 aaKnown RBP10.4□□□□□ -0.74
USF1-208ENST00000528768 ZNF84P51523 738 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 LSM6P62312 80 aaKnown RBP10.4□□□□□ -0.74
USF1-208ENST00000528768 GRB2P62993 217 aaKnown RBP10.4□□□□□ -0.74
USF1-208ENST00000528768 RAC1P63000 192 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 MFGE8Q08431 387 aaPredicted RBP10.4□□□□□ -0.74
USF1-208ENST00000528768 POU4F3Q15319 338 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 PDSS1Q5T2R2 415 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 OLFML2AQ68BL7 652 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 ESPNLQ6ZVH7 1005 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 PRSS45Q7RTY3 260 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 FGD2Q7Z6J4 655 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 LIX1LQ8IVB5 337 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 LINC00346Q8IVM7 164 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 SERPINA12Q8IW75 414 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 IZUMO1Q8IYV9 350 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 ELMOD2Q8IZ81 293 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 CCDC54Q8NEL0 328 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 OR6N1Q8NGY5 312 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 OR10AC1Q8NH08 325 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 OR52I2Q8NH67 350 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 RELTQ969Z4 430 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 PTX4Q96A99 478 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 JSRP1Q96MG2 331 aaPredicted RBP10.4□□□□□ -0.74
USF1-208ENST00000528768 SORCS2Q96PQ0 1159 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 SLCO5A1Q9H2Y9 848 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 OR51J1Q9H342 316 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms