RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 IL5RAQ01344 420 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 KLRB1Q12918 225 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 TFDP2Q14188 446 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 ABRAXAS2Q15018 415 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 PTGES3Q15185 160 aaKnown RBP2.64□□□□□ -1.99
CD44-229ENST00000528672 OR4D1Q15615 310 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 MRPL23Q16540 153 aaKnown RBP2.64□□□□□ -1.99
CD44-229ENST00000528672 KCTD19Q17RG1 926 aaPredicted RBP2.64□□□□□ -1.99
CD44-229ENST00000528672 TMEM30BQ3MIR4 351 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 TIGITQ495A1 244 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 VPS26BQ4G0F5 336 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 VWA2Q5GFL6 755 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 DMRTC1Q5HYR2 192 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 OR2B11Q5JQS5 317 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 GCSAMLQ5JQS6 135 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 TIMM23BQ5SRD1 257 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 UTF1Q5T230 341 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 FBXW9Q5XUX1 488 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 TRIQKQ629K1 86 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 ZNF57Q68EA5 555 aaPredicted RBP2.64□□□□□ -1.99
CD44-229ENST00000528672 FAM45BPQ6NSW5 357 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 ADAM5Q6NVV9 412 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 LPCAT3Q6P1A2 487 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 SPNS3Q6ZMD2 512 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 ZNF836Q6ZNA1 936 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 TMEM144Q7Z5S9 345 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 ZNF589Q86UQ0 364 aaPredicted RBP2.64□□□□□ -1.99
CD44-229ENST00000528672 TMEM25Q86YD3 366 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 OR2M7Q8NG81 312 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 OR7G2Q8NG99 324 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 OR4D9Q8NGE8 314 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 OR8J3Q8NGG0 315 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 GRPEL2Q8TAA5 225 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 FLVCR1-AS1Q8TAF5 88 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 MRAPQ8TCY5 172 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 C16orf78Q8WTQ4 265 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 PIH1D2Q8WWB5 315 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 UBE2E3Q969T4 207 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 NOL4LQ96MY1 436 aaPredicted RBP2.64□□□□□ -1.99
CD44-229ENST00000528672 CLCC1Q96S66 551 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 STACQ99469 402 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 TCEAL7Q9BRU2 100 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 DCUN1D5Q9BTE7 237 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 GGACTQ9BVM4 153 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 HCAR1Q9BXC0 346 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 FGFBP2Q9BYJ0 223 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 RAB34Q9BZG1 259 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 ULBP2Q9BZM5 246 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 CCDC90BQ9GZT6 254 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 PPDPFQ9H3Y8 114 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 JPT2Q9H910 190 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 PLEKHA1Q9HB21 404 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 POPDC2Q9HBU9 364 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 C6orf50Q9HD87 102 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 IMPAD1Q9NX62 359 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 BFARQ9NZS9 450 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 MDFICQ9P1T7 246 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 WRAP73Q9P2S5 460 aaPredicted RBP2.64□□□□□ -1.99
CD44-229ENST00000528672 PRODH2Q9UF12 536 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 IKZF2Q9UKS7 526 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 ARL5AQ9Y689 179 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 ZNF532Q9HCE3 1301 aa2.64□□□□□ -1.99
CD44-229ENST00000528672 DHX57Q6P158 1386 aaKnown RBP2.63□□□□□ -1.99
CD44-229ENST00000528672 WRNQ14191 1432 aaPredicted RBP eCLIP2.63□□□□□ -1.99
CD44-229ENST00000528672 FAM135BQ49AJ0 1406 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 CEP162Q5TB80 1403 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 SNED1Q8TER0 1413 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.63□□□□□ -1.99
CD44-229ENST00000528672 A0A1B0GTH9 108 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 A0A1B0GTI1 187 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 SMIM31A0A1B0GVY4 71 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 ZNF840PA6NDX5 716 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 FRG2CA6NGY1 282 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 EVPLLA8MZ36 301 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 G3V3Y1 287 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 H0Y980 276 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 H3BQF6 201 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 DFFAO00273 331 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 CDC7O00311 574 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 CXCR6O00574 342 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 KPNA4O00629 521 aaPredicted RBP2.63□□□□□ -1.99
CD44-229ENST00000528672 SLC16A4O15374 487 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 RGS16O15492 202 aaPredicted RBP2.63□□□□□ -1.99
CD44-229ENST00000528672 RP2O75695 350 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 SC5DO75845 299 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 SULT1C4O75897 302 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 GLSO94925 669 aaPredicted RBP2.63□□□□□ -1.99
CD44-229ENST00000528672 RCBTB2O95199 551 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 SEMA4FO95754 770 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 TSPAN13O95857 204 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 HTR1AP08908 422 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 ACSM4P0C7M7 580 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 OCM2P0CE71 109 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 PET100P0DJ07 73 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 UCHL3P15374 230 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 SPI1P17947 270 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 BCL3P20749 454 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 ATP6V1B2P21281 511 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 GABRR1P24046 479 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 KRTAP5-9P26371 169 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms