RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 CFL1P23528 166 aaKnown RBP11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 PEX2P28328 305 aa11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 HSD11B1P28845 292 aa11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 NAA10P41227 235 aaPredicted RBP11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 EGR3Q06889 387 aa11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 IL18R1Q13478 541 aa11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 RIPK1Q13546 671 aa11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 CLEC12BQ2HXU8 276 aa11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 SPATA46Q5T0L3 261 aa11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 LPCAT4Q643R3 524 aa11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 PRSS45Q7RTY3 260 aa11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 ENTHD1Q8IYW4 607 aa11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 ZNF679Q8IYX0 411 aa11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 WFDC11Q8NEX6 87 aa11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 OR2T27Q8NH04 317 aa11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 THEM6Q8WUY1 208 aa11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 SPSB4Q96A44 273 aa11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 VRK1Q99986 396 aaPredicted RBP11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 TMUB1Q9BVT8 246 aa11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 MROQ9BYG7 248 aa11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 OR51B6Q9H340 312 aa11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 RGCCQ9H4X1 137 aa11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 PURGQ9UJV8 347 aaKnown RBP11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 PCDHGB1Q9Y5G3 927 aa11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 HSPE1-MOB4S4R3N1 261 aa11.17□□□□□ -0.62
CNKSR1-211ENST00000528001 LOC390937A0A1W2PQ73 354 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 IQCF6A8MYZ5 107 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 ZNF670-ZNF695F2Z2N8 137 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 H0YAE9 185 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 NDUFS7O75251 213 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 ALDH3B1P43353 468 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 MTNR1AP48039 350 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 ZNF81P51508 661 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 PSMA6P60900 246 aaKnown RBP11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 ACTC1P68032 377 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 ACTA1P68133 377 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 ADARB1P78563 741 aaKnown RBP11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 CDK5R2Q13319 367 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 GK2Q14410 553 aaPredicted RBP11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 CLEC2AQ6UVW9 174 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 BCDIN3DQ7Z5W3 292 aaKnown RBP11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 SLC35F2Q8IXU6 374 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 ZNF786Q8N393 782 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 ZNF540Q8NDQ6 660 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 SETD9Q8NE22 299 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 CMBLQ96DG6 245 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 Q96MF0 132 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 OR8B4Q96RC9 309 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 AMELYQ99218 206 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 MYCBPQ99417 103 aaPredicted RBP11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 RHNO1Q9BSD3 238 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 REPIN1Q9BWE0 567 aaKnown RBP11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 SLC22A4Q9H015 551 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 POFUT1Q9H488 388 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 DLL4Q9NR61 685 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 MRPS18AQ9NVS2 196 aaKnown RBP11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 FZR1Q9UM11 496 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 ARFGEF3Q5TH69 2177 aa11.16□□□□□ -0.62
CNKSR1-211ENST00000528001 H0YHG0 523 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 J3QRE1 110 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 TIMM8AO60220 97 aaPredicted RBP11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 SSX4O60224 188 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 SULT1C4O75897 302 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 SLC25A16P16260 332 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 GIFP27352 417 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 DDOSTP39656 456 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 SLC6A9P48067 706 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 CX3CR1P49238 355 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 PDLIM4P50479 330 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 MMP16P51512 607 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 PRKXP51817 358 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 MAD2L1BPQ15013 274 aaPredicted RBP11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 SNCBQ16143 134 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 LRRC36Q1X8D7 754 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 TMEM255AQ5JRV8 349 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 ZNF691Q5VV52 312 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 ZNF322Q6U7Q0 402 aaPredicted RBP11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 PGAP1Q75T13 922 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 KRT77Q7Z794 578 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 NAA40Q86UY6 237 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 GALNT4Q8N4A0 578 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 DHRSXQ8N5I4 330 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 ZNF283Q8N7M2 679 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 OR8G5Q8NG78 346 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 OR51G2Q8NGK0 314 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 MOB1AQ9H8S9 216 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 DNAJC27Q9NZQ0 273 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 EXOGQ9Y2C4 368 aaKnown RBP11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 KLHDC2Q9Y2U9 406 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 NOP16Q9Y3C1 178 aaKnown RBP11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 LRP12Q9Y561 859 aa11.15□□□□□ -0.62
CNKSR1-211ENST00000528001 ENTPD6O75354 484 aa11.14□□□□□ -0.63
CNKSR1-211ENST00000528001 MRPL3P09001 348 aaKnown RBP11.14□□□□□ -0.63
CNKSR1-211ENST00000528001 NAT2P11245 290 aa11.14□□□□□ -0.63
CNKSR1-211ENST00000528001 DAOP14920 347 aa11.14□□□□□ -0.63
CNKSR1-211ENST00000528001 RIDAP52758 137 aaKnown RBP11.14□□□□□ -0.63
CNKSR1-211ENST00000528001 ZNF121P58317 390 aaPredicted RBP11.14□□□□□ -0.63
CNKSR1-211ENST00000528001 CXCR4P61073 352 aa11.14□□□□□ -0.63
CNKSR1-211ENST00000528001 ZNF829Q3KNS6 432 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms