RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SBK2P0C263 348 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 GSSP48637 474 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 CENPAP49450 140 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 HILS1P60008 231 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 TSPAN31Q12999 210 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 LRRC36Q1X8D7 754 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 RPL13AP3Q6NVV1 102 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 LEG1Q6P5S2 330 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 Q6ZR03 302 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 COLCA1Q6ZS62 124 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 ZBTB46Q86UZ6 589 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 OR6V1Q8N148 313 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 MUC20Q8N307 709 aaPredicted RBP11.98□□□□□ -0.49
CAPN1-212ENST00000527887 CBR4Q8N4T8 237 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 OR8G5Q8NG78 346 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 SLC7A6Q92536 515 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 ZNF582Q96NG8 517 aaPredicted RBP11.98□□□□□ -0.49
CAPN1-212ENST00000527887 RBM4BQ9BQ04 359 aaKnown RBP11.98□□□□□ -0.49
CAPN1-212ENST00000527887 IFT27Q9BW83 186 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 RBM4Q9BWF3 364 aaKnown RBP11.98□□□□□ -0.49
CAPN1-212ENST00000527887 CDADC1Q9BWV3 514 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 SUCNR1Q9BXA5 334 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 GABARAPL1Q9H0R8 117 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 POFUT1Q9H488 388 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 C7orf69Q9H7B7 122 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 PATZ1Q9HBE1 687 aaKnown RBP11.98□□□□□ -0.49
CAPN1-212ENST00000527887 SRA1Q9HD15 236 aaKnown RBP11.98□□□□□ -0.49
CAPN1-212ENST00000527887 UBAP1Q9NZ09 502 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 KCNG2Q9UJ96 466 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 LHFPL6Q9Y693 200 aa11.98□□□□□ -0.49
CAPN1-212ENST00000527887 LOC105371242A0A075B767 164 aa11.97□□□□□ -0.49
CAPN1-212ENST00000527887 TRIM77I1YAP6 450 aa11.97□□□□□ -0.49
CAPN1-212ENST00000527887 HAX1O00165 279 aa11.97□□□□□ -0.49
CAPN1-212ENST00000527887 DCTN6O00399 190 aa11.97□□□□□ -0.49
CAPN1-212ENST00000527887 DENRO43583 198 aaKnown RBP11.97□□□□□ -0.49
CAPN1-212ENST00000527887 E2F6O75461 281 aa11.97□□□□□ -0.49
CAPN1-212ENST00000527887 AVPP01185 164 aa11.97□□□□□ -0.49
CAPN1-212ENST00000527887 ALPLP05186 524 aa11.97□□□□□ -0.49
CAPN1-212ENST00000527887 HIST1H1CP16403 213 aaKnown RBP11.97□□□□□ -0.49
CAPN1-212ENST00000527887 FPR2P25090 351 aa11.97□□□□□ -0.49
CAPN1-212ENST00000527887 SRP9P49458 86 aaKnown RBP11.97□□□□□ -0.49
CAPN1-212ENST00000527887 ALDH3A2P51648 485 aa11.97□□□□□ -0.49
CAPN1-212ENST00000527887 BTG1P62324 171 aa11.97□□□□□ -0.49
CAPN1-212ENST00000527887 ATG16L2Q8NAA4 619 aa11.97□□□□□ -0.49
CAPN1-212ENST00000527887 SLC26A10Q8NG04 563 aa11.97□□□□□ -0.49
CAPN1-212ENST00000527887 OR2AJ1Q8NGZ0 328 aa11.97□□□□□ -0.49
CAPN1-212ENST00000527887 FAM216AQ8WUB2 273 aa11.97□□□□□ -0.49
CAPN1-212ENST00000527887 ITLN1Q8WWA0 313 aa11.97□□□□□ -0.49
CAPN1-212ENST00000527887 TSSK2Q96PF2 358 aa11.97□□□□□ -0.49
CAPN1-212ENST00000527887 OR2V2Q96R30 315 aa11.97□□□□□ -0.49
CAPN1-212ENST00000527887 NMNAT3Q96T66 252 aa11.97□□□□□ -0.49
CAPN1-212ENST00000527887 SLC29A1Q99808 456 aa11.97□□□□□ -0.49
CAPN1-212ENST00000527887 HCAR1Q9BXC0 346 aa11.97□□□□□ -0.49
CAPN1-212ENST00000527887 C1QTNF5Q9BXJ0 243 aa11.97□□□□□ -0.49
CAPN1-212ENST00000527887 A0A1B0GWJ7 208 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 IQCF6A8MYZ5 107 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 H0YAE9 185 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 TMEM178BH3BS89 294 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 DBHP09172 617 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 ADRA2CP18825 462 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 RRM2P31350 389 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 MDH2P40926 338 aaKnown RBP11.96□□□□□ -0.49
CAPN1-212ENST00000527887 SLC6A9P48067 706 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 AQP4P55087 323 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 LCN2P80188 198 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 MALLQ13021 153 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 ZNF181Q2M3W8 571 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 KRTAP27-1Q3LI81 207 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 SPRNQ5BIV9 151 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 SLC18B1Q6NT16 456 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 C12orf54Q6X4T0 127 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 ZNF620Q6ZNG0 422 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 OR4K13Q8NH42 304 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 ERGIC1Q969X5 290 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 PITX2Q99697 317 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 SLC30A2Q9BRI3 323 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 GCM1Q9NP62 436 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 TMEM100Q9NV29 134 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 PTTG3PQ9NZH4 202 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 CYB5R1Q9UHQ9 305 aa11.96□□□□□ -0.49
CAPN1-212ENST00000527887 SAMHD1Q9Y3Z3 626 aaKnown RBP11.96□□□□□ -0.49
CAPN1-212ENST00000527887 SAC3D1A6NKF1 404 aa11.95□□□□□ -0.5
CAPN1-212ENST00000527887 LRRC30A6NM36 301 aa11.95□□□□□ -0.5
CAPN1-212ENST00000527887 A8MXK9 166 aa11.95□□□□□ -0.5
CAPN1-212ENST00000527887 ANXA8P13928 327 aa11.95□□□□□ -0.5
CAPN1-212ENST00000527887 COMPP49747 757 aaPredicted RBP11.95□□□□□ -0.5
CAPN1-212ENST00000527887 RAD23AP54725 363 aa11.95□□□□□ -0.5
CAPN1-212ENST00000527887 MED21Q13503 144 aa11.95□□□□□ -0.5
CAPN1-212ENST00000527887 RSPO1Q2MKA7 263 aaPredicted RBP11.95□□□□□ -0.5
CAPN1-212ENST00000527887 OR2T2Q6IF00 324 aa11.95□□□□□ -0.5
CAPN1-212ENST00000527887 PGBD2Q6P3X8 592 aa11.95□□□□□ -0.5
CAPN1-212ENST00000527887 C1orf87Q8N0U7 546 aa11.95□□□□□ -0.5
CAPN1-212ENST00000527887 BPIFB2Q8N4F0 458 aa11.95□□□□□ -0.5
CAPN1-212ENST00000527887 CELF2-AS1Q8N7Q2 184 aa11.95□□□□□ -0.5
CAPN1-212ENST00000527887 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.95□□□□□ -0.5
CAPN1-212ENST00000527887 OR52L1Q8NGH7 329 aa11.95□□□□□ -0.5
CAPN1-212ENST00000527887 OR4C15Q8NGM1 316 aa11.95□□□□□ -0.5
CAPN1-212ENST00000527887 MEGF10Q96KG7 1140 aa11.95□□□□□ -0.5
CAPN1-212ENST00000527887 NR1H4Q96RI1 486 aaPredicted RBP11.95□□□□□ -0.5
CAPN1-212ENST00000527887 SIGLEC11Q96RL6 698 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms