RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 CDAP32320 146 aa13.59□□□□□ -0.23
USH1C-207ENST00000527720 ZNF133P52736 654 aaPredicted RBP13.59□□□□□ -0.23
USH1C-207ENST00000527720 MOGAT2Q3SYC2 334 aa13.59□□□□□ -0.23
USH1C-207ENST00000527720 OR10K2Q6IF99 312 aa13.59□□□□□ -0.23
USH1C-207ENST00000527720 ZNF584Q8IVC4 421 aa13.59□□□□□ -0.23
USH1C-207ENST00000527720 OR51E1Q8TCB6 317 aa13.59□□□□□ -0.23
USH1C-207ENST00000527720 DPCDQ9BVM2 203 aaPredicted RBP13.59□□□□□ -0.23
USH1C-207ENST00000527720 GLTPQ9NZD2 209 aa13.59□□□□□ -0.23
USH1C-207ENST00000527720 MPC2O95563 127 aa13.59□□□□□ -0.23
USH1C-207ENST00000527720 CD63P08962 238 aa13.59□□□□□ -0.23
USH1C-207ENST00000527720 MPZP25189 248 aa13.59□□□□□ -0.23
USH1C-207ENST00000527720 SSTR2P30874 369 aa13.59□□□□□ -0.23
USH1C-207ENST00000527720 OR3A3P47888 321 aa13.59□□□□□ -0.23
USH1C-207ENST00000527720 CLDN17P56750 224 aa13.59□□□□□ -0.23
USH1C-207ENST00000527720 EIF3IQ13347 325 aaKnown RBP13.59□□□□□ -0.23
USH1C-207ENST00000527720 UNC119Q13432 240 aa13.59□□□□□ -0.23
USH1C-207ENST00000527720 ZMYND11Q15326 602 aa13.59□□□□□ -0.23
USH1C-207ENST00000527720 C10orf128Q5T292 105 aa13.59□□□□□ -0.23
USH1C-207ENST00000527720 MUC20Q8N307 709 aaPredicted RBP13.59□□□□□ -0.23
USH1C-207ENST00000527720 OR8B12Q8NGG6 310 aa13.59□□□□□ -0.23
USH1C-207ENST00000527720 NAA11Q9BSU3 229 aaPredicted RBP13.59□□□□□ -0.23
USH1C-207ENST00000527720 CDCP1Q9H5V8 836 aa13.59□□□□□ -0.23
USH1C-207ENST00000527720 PROK2Q9HC23 129 aa13.59□□□□□ -0.23
USH1C-207ENST00000527720 SLC2A8Q9NY64 477 aa13.59□□□□□ -0.23
USH1C-207ENST00000527720 UBQLN2Q9UHD9 624 aa13.59□□□□□ -0.23
USH1C-207ENST00000527720 OPN4Q9UHM6 478 aa13.59□□□□□ -0.23
USH1C-207ENST00000527720 NSG1A0A0A6YYJ2 146 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 TMEM82A0PJX8 343 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 HMSDA8MTL9 139 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 PATE3B3GLJ2 98 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 M0R233 179 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 AMY2AP04746 511 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 ZNF735P0CB33 412 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 CCL3P10147 92 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 NFYAP23511 347 aaPredicted RBP13.58□□□□□ -0.24
USH1C-207ENST00000527720 ZNF93P35789 620 aaPredicted RBP13.58□□□□□ -0.24
USH1C-207ENST00000527720 FOLR3P41439 243 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 GUCA1AP43080 201 aaPredicted RBP13.58□□□□□ -0.24
USH1C-207ENST00000527720 ZNF121P58317 390 aaPredicted RBP13.58□□□□□ -0.24
USH1C-207ENST00000527720 MLF1P58340 268 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 CSNK2A1P68400 391 aaPredicted RBP13.58□□□□□ -0.24
USH1C-207ENST00000527720 SLC23A3Q6PIS1 610 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 IDO2Q6ZQW0 420 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 FOXL2NBQ6ZUU3 175 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 Q7L0L9 218 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 OR2W3Q7Z3T1 314 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 RPS19BP1Q86WX3 136 aaKnown RBP13.58□□□□□ -0.24
USH1C-207ENST00000527720 OR8H3Q8N146 312 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 ACBD4Q8NC06 268 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 OR13C9Q8NGT0 318 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 TMEM54Q969K7 222 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 GUCD1Q96NT3 240 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 EDEM2Q9BV94 578 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 KLK13Q9UKR3 277 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 AUP1Q9Y679 476 aa13.58□□□□□ -0.24
USH1C-207ENST00000527720 TMEM235A6NFC5 223 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 TMEM14DPA8MWL7 114 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 DISC1C4P0D8 188 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 H3BUI4 141 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 PDGFBP01127 241 aaPredicted RBP13.57□□□□□ -0.24
USH1C-207ENST00000527720 GP1BAP07359 652 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 VSIG8P0DPA2 414 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 CX3CR1P49238 355 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 EXOSC2Q13868 293 aaKnown RBP13.57□□□□□ -0.24
USH1C-207ENST00000527720 GRK1Q15835 563 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 C4orf46Q504U0 113 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 ESCO2Q56NI9 601 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 TRIM61Q5EBN2 209 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 DOK3Q7L591 496 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 ABHD12BQ7Z5M8 362 aaPredicted RBP13.57□□□□□ -0.24
USH1C-207ENST00000527720 GALNT16Q8N428 558 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 TMEM156Q8N614 296 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 TNFAIP8L1Q8WVP5 186 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 GAL3ST1Q99999 423 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 POFUT1Q9H488 388 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 MAB21L2Q9Y586 359 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 COL27A1Q8IZC6 1860 aaPredicted RBP13.57□□□□□ -0.24
USH1C-207ENST00000527720 B4E171 279 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 F5H5P2 479 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 RER1O15258 196 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 MSR1P21757 451 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 TSPAN7P41732 249 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 CSNK1A1P48729 337 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 PRKXP51817 358 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 OPCMLQ14982 345 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 FAM189A2Q15884 450 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 CLLU1Q5K131 121 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 CHMP1BQ7LBR1 199 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 MAML2Q8IZL2 1156 aaPredicted RBP13.57□□□□□ -0.24
USH1C-207ENST00000527720 BPIFB2Q8N4F0 458 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 DTWD2Q8NBA8 298 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 TMEM41AQ96HV5 264 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 CITED4Q96RK1 184 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 PRRT1Q99946 306 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 TINAGL1Q9GZM7 467 aaPredicted RBP13.57□□□□□ -0.24
USH1C-207ENST00000527720 NELFAQ9H3P2 528 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 HPF1Q9NWY4 346 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 SLC39A1Q9NY26 324 aa13.57□□□□□ -0.24
USH1C-207ENST00000527720 MYEF2Q9P2K5 600 aaKnown RBP13.57□□□□□ -0.24
USH1C-207ENST00000527720 DKKL1Q9UK85 242 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms