RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 TMEM129A0AVI4 362 aa17.81■□□□□ 0.44
CD44-222ENST00000526025 PRR32B1ATL7 298 aa17.81■□□□□ 0.44
CD44-222ENST00000526025 SULT1C4O75897 302 aa17.81■□□□□ 0.44
CD44-222ENST00000526025 IGHA1P01876 353 aa17.81■□□□□ 0.44
CD44-222ENST00000526025 LCATP04180 440 aa17.81■□□□□ 0.44
CD44-222ENST00000526025 GCH1P30793 250 aa17.81■□□□□ 0.44
CD44-222ENST00000526025 SLC6A9P48067 706 aa17.81■□□□□ 0.44
CD44-222ENST00000526025 CX3CR1P49238 355 aa17.81■□□□□ 0.44
CD44-222ENST00000526025 PRKXP51817 358 aa17.81■□□□□ 0.44
CD44-222ENST00000526025 RIDAP52758 137 aaKnown RBP17.81■□□□□ 0.44
CD44-222ENST00000526025 ERVS71-1P61550 626 aa17.81■□□□□ 0.44
CD44-222ENST00000526025 CSNK2BP67870 215 aa17.81■□□□□ 0.44
CD44-222ENST00000526025 SMN1Q16637 294 aaKnown RBP17.81■□□□□ 0.44
CD44-222ENST00000526025 LRRN1Q6UXK5 716 aa17.81■□□□□ 0.44
CD44-222ENST00000526025 PRSS45Q7RTY3 260 aa17.81■□□□□ 0.44
CD44-222ENST00000526025 RFLNBQ8N5W9 214 aa17.81■□□□□ 0.44
CD44-222ENST00000526025 ACBD7Q8N6N7 88 aa17.81■□□□□ 0.44
CD44-222ENST00000526025 OR52H1Q8NGJ2 320 aa17.81■□□□□ 0.44
CD44-222ENST00000526025 KLF14Q8TD94 323 aaPredicted RBP17.81■□□□□ 0.44
CD44-222ENST00000526025 ZNF184Q99676 751 aaPredicted RBP17.81■□□□□ 0.44
CD44-222ENST00000526025 OR2J1Q9GZK6 312 aa17.81■□□□□ 0.44
CD44-222ENST00000526025 OPA3Q9H6K4 179 aa17.81■□□□□ 0.44
CD44-222ENST00000526025 FGF20Q9NP95 211 aaPredicted RBP17.81■□□□□ 0.44
CD44-222ENST00000526025 PLCXD1Q9NUJ7 323 aa17.81■□□□□ 0.44
CD44-222ENST00000526025 ZNF701Q9NV72 531 aaPredicted RBP17.81■□□□□ 0.44
CD44-222ENST00000526025 SLCO1C1Q9NYB5 712 aa17.81■□□□□ 0.44
CD44-222ENST00000526025 CGGBP1Q9UFW8 167 aaPredicted RBP17.81■□□□□ 0.44
CD44-222ENST00000526025 GPR160Q9UJ42 338 aa17.81■□□□□ 0.44
CD44-222ENST00000526025 STARD10Q9Y365 291 aa17.81■□□□□ 0.44
CD44-222ENST00000526025 USF3Q68DE3 2245 aa17.8■□□□□ 0.44
CD44-222ENST00000526025 H7C417 338 aa17.8■□□□□ 0.44
CD44-222ENST00000526025 APOL3O95236 402 aa17.8■□□□□ 0.44
CD44-222ENST00000526025 RAC2P15153 192 aa17.8■□□□□ 0.44
CD44-222ENST00000526025 PPOXP50336 477 aa17.8■□□□□ 0.44
CD44-222ENST00000526025 MALLQ13021 153 aa17.8■□□□□ 0.44
CD44-222ENST00000526025 SNCBQ16143 134 aa17.8■□□□□ 0.44
CD44-222ENST00000526025 ZNF684Q5T5D7 378 aa17.8■□□□□ 0.44
CD44-222ENST00000526025 AMBNQ9NP70 447 aa17.8■□□□□ 0.44
CD44-222ENST00000526025 PMF1-BGLAPU3KQ54 211 aa17.8■□□□□ 0.44
CD44-222ENST00000526025 CCDC168Q8NDH2 2452 aa17.79■□□□□ 0.44
CD44-222ENST00000526025 KRT8P05787 483 aa17.79■□□□□ 0.44
CD44-222ENST00000526025 PIPP12273 146 aaPredicted RBP17.79■□□□□ 0.44
CD44-222ENST00000526025 KITLGP21583 273 aa17.79■□□□□ 0.44
CD44-222ENST00000526025 MMP16P51512 607 aa17.79■□□□□ 0.44
CD44-222ENST00000526025 ZNF121P58317 390 aaPredicted RBP17.79■□□□□ 0.44
CD44-222ENST00000526025 ZNF85Q03923 595 aa17.79■□□□□ 0.44
CD44-222ENST00000526025 DEFB113Q30KQ7 82 aa17.79■□□□□ 0.44
CD44-222ENST00000526025 ZNF829Q3KNS6 432 aaPredicted RBP17.79■□□□□ 0.44
CD44-222ENST00000526025 LAIR2Q6ISS4 152 aa17.79■□□□□ 0.44
CD44-222ENST00000526025 PLEKHG7Q6ZR37 379 aa17.79■□□□□ 0.44
CD44-222ENST00000526025 KCTD20Q7Z5Y7 419 aa17.79■□□□□ 0.44
CD44-222ENST00000526025 NAA40Q86UY6 237 aa17.79■□□□□ 0.44
CD44-222ENST00000526025 LRRC75A-AS1Q8N1F1 130 aa17.79■□□□□ 0.44
CD44-222ENST00000526025 ITFG2Q969R8 447 aa17.79■□□□□ 0.44
CD44-222ENST00000526025 HAVCR1Q96D42 359 aa17.79■□□□□ 0.44
CD44-222ENST00000526025 MRPL48Q96GC5 212 aaKnown RBP17.79■□□□□ 0.44
CD44-222ENST00000526025 GSX2Q9BZM3 304 aa17.79■□□□□ 0.44
CD44-222ENST00000526025 RGCCQ9H4X1 137 aa17.79■□□□□ 0.44
CD44-222ENST00000526025 CNOT2Q9NZN8 540 aaKnown RBP17.79■□□□□ 0.44
CD44-222ENST00000526025 MRM2Q9UI43 246 aaKnown RBP17.79■□□□□ 0.44
CD44-222ENST00000526025 IKZF2Q9UKS7 526 aa17.79■□□□□ 0.44
CD44-222ENST00000526025 CSMD2Q7Z408 3487 aa17.79■□□□□ 0.44
CD44-222ENST00000526025 CHD3Q12873 2000 aaKnown RBP17.78■□□□□ 0.44
CD44-222ENST00000526025 DAPL1A0PJW8 107 aa17.78■□□□□ 0.44
CD44-222ENST00000526025 METTL15A6NJ78 407 aa17.78■□□□□ 0.44
CD44-222ENST00000526025 XRCC2O43543 280 aa17.78■□□□□ 0.44
CD44-222ENST00000526025 DCKP27707 260 aa17.78■□□□□ 0.44
CD44-222ENST00000526025 LIPAP38571 399 aa17.78■□□□□ 0.44
CD44-222ENST00000526025 CDONQ4KMG0 1287 aa17.78■□□□□ 0.44
CD44-222ENST00000526025 SPATA46Q5T0L3 261 aa17.78■□□□□ 0.44
CD44-222ENST00000526025 SSX6Q7RTT6 188 aa17.78■□□□□ 0.44
CD44-222ENST00000526025 OR52I1Q8NGK6 324 aa17.78■□□□□ 0.44
CD44-222ENST00000526025 SPSB4Q96A44 273 aa17.78■□□□□ 0.44
CD44-222ENST00000526025 TBX5Q99593 518 aa17.78■□□□□ 0.44
CD44-222ENST00000526025 SYT3Q9BQG1 590 aa17.78■□□□□ 0.44
CD44-222ENST00000526025 POFUT1Q9H488 388 aa17.78■□□□□ 0.44
CD44-222ENST00000526025 MOB1AQ9H8S9 216 aa17.78■□□□□ 0.44
CD44-222ENST00000526025 DUSP13Q9UII6 198 aa17.78■□□□□ 0.44
CD44-222ENST00000526025 ZNF391Q9UJN7 358 aa17.78■□□□□ 0.44
CD44-222ENST00000526025 EFCAB10A6NFE3 127 aa17.77■□□□□ 0.44
CD44-222ENST00000526025 M0R233 179 aa17.77■□□□□ 0.44
CD44-222ENST00000526025 SRSF10O75494 262 aaKnown RBP17.77■□□□□ 0.44
CD44-222ENST00000526025 ANXA2P07355 339 aaKnown RBP17.77■□□□□ 0.44
CD44-222ENST00000526025 SELEP16581 610 aa17.77■□□□□ 0.44
CD44-222ENST00000526025 CFL1P23528 166 aaKnown RBP17.77■□□□□ 0.44
CD44-222ENST00000526025 MPV17P39210 176 aa17.77■□□□□ 0.44
CD44-222ENST00000526025 ACTA2P62736 377 aa17.77■□□□□ 0.44
CD44-222ENST00000526025 ACTG2P63267 376 aa17.77■□□□□ 0.44
CD44-222ENST00000526025 SNAI3Q3KNW1 292 aa17.77■□□□□ 0.44
CD44-222ENST00000526025 LRP11Q86VZ4 500 aa17.77■□□□□ 0.44
CD44-222ENST00000526025 SNX33Q8WV41 574 aa17.77■□□□□ 0.44
CD44-222ENST00000526025 TRMT61AQ96FX7 289 aaKnown RBP17.77■□□□□ 0.44
CD44-222ENST00000526025 CACNG6Q9BXT2 260 aa17.77■□□□□ 0.44
CD44-222ENST00000526025 OR10A2Q9H208 303 aa17.77■□□□□ 0.44
CD44-222ENST00000526025 Q9H521 79 aa17.77■□□□□ 0.44
CD44-222ENST00000526025 CYSLTR2Q9NS75 346 aa17.77■□□□□ 0.44
CD44-222ENST00000526025 FAM206AQ9NX38 181 aa17.77■□□□□ 0.44
CD44-222ENST00000526025 FZR1Q9UM11 496 aa17.77■□□□□ 0.44
CD44-222ENST00000526025 MYRFQ9Y2G1 1151 aa17.77■□□□□ 0.44
CD44-222ENST00000526025 TMEM269A0A1B0GVZ9 245 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms