RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 TCTAP57738 103 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 LSM11P83369 360 aaKnown RBP eCLIP12.48□□□□□ -0.41
LRRK1-202ENST00000525284 GDF7Q7Z4P5 450 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 GOT1L1Q8NHS2 421 aaPredicted RBP12.48□□□□□ -0.41
LRRK1-202ENST00000525284 SPACA5Q96QH8 159 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 OR4C12Q96R67 309 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 TWSG1Q9GZX9 223 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 OR4E1P0C645 316 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 CCL11P51671 97 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 C17orf67Q0P5P2 114 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 MARCH3Q86UD3 253 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 OR52L2PQ8NGH6 319 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 TAAR9Q96RI9 348 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 ATG101Q9BSB4 218 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 TMEM9BQ9NQ34 198 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 ATP23Q9Y6H3 246 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 AP4M1O00189 453 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 ICAM2P13598 275 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 MGMTP16455 207 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 CRISP2P16562 243 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 HRH1P35367 487 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 PIGPP57054 158 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 C5orf46Q6UWT4 87 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 PFN4Q8NHR9 129 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 MARCH1Q8TCQ1 289 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 ZDHHC16Q969W1 377 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 RAB37Q96AX2 223 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 C2orf50Q96LR7 162 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 TAAR6Q96RI8 345 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 EPHX3Q9H6B9 360 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 HES4Q9HCC6 221 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 PLRG1O43660 514 aaKnown RBP12.48□□□□□ -0.41
LRRK1-202ENST00000525284 AKR7A3O95154 331 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 HNRNPA1P09651 372 aaKnown RBP eCLIP12.48□□□□□ -0.41
LRRK1-202ENST00000525284 COMPP49747 757 aaPredicted RBP12.48□□□□□ -0.41
LRRK1-202ENST00000525284 TMEM251Q8N6I4 163 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 ZNF680Q8NEM1 530 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 PECRQ9BY49 303 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 RGPD2P0DJD1 1756 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 PRSS38A1L453 326 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 A6NDN8 102 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 H7C2G1 150 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 CST7O76096 145 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 FAM24BQ8N5W8 94 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 CPEB3Q8NE35 698 aaKnown RBP12.48□□□□□ -0.41
LRRK1-202ENST00000525284 OR52B4Q8NGK2 314 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 TTC9Q92623 222 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 SLC25A46Q96AG3 418 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 OR2T8A6NH00 312 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 OR4C46A6NHA9 309 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 H0YGG7 62 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 M0R3E3 92 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 EIF1BO60739 113 aaKnown RBP12.47□□□□□ -0.41
LRRK1-202ENST00000525284 CHRNA7P36544 502 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 MIDNQ504T8 468 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 ATOH1Q92858 354 aaPredicted RBP12.47□□□□□ -0.41
LRRK1-202ENST00000525284 P2RY12Q9H244 342 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 LMAN1LQ9HAT1 526 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 KIR2DS5A0A0G2JLQ3 304 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 A0A0G2JNG1 304 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 KIR2DS3K7RE56 304 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 PRKRAO75569 313 aaKnown RBP12.47□□□□□ -0.41
LRRK1-202ENST00000525284 MMP11P24347 488 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 IRS1P35568 1242 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 GNG4P50150 75 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 KIR2DS5Q14953 304 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 OR2L13Q8N349 312 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 FAHD2AQ96GK7 314 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 SRD5A3Q9H8P0 318 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 CA12O43570 354 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 HCRTR1O43613 425 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 PRTGQ2VWP7 1150 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 MISPQ8IVT2 679 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 NALCNQ8IZF0 1738 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 LOC107986453A0A1B0GWG9 222 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 CTSCP53634 463 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 WDTC1Q8N5D0 677 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 OR4C16Q8NGL9 310 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 NUDCD2Q8WVJ2 157 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 TXNIPQ9H3M7 391 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 LSM2Q9Y333 95 aaKnown RBP12.47□□□□□ -0.41
LRRK1-202ENST00000525284 ALDOCP09972 364 aaKnown RBP12.47□□□□□ -0.41
LRRK1-202ENST00000525284 INHBCP55103 352 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 ERVS71-1P61550 626 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 TMEM267Q0VDI3 215 aaPredicted RBP12.47□□□□□ -0.41
LRRK1-202ENST00000525284 IHHQ14623 411 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 MANEAQ5SRI9 462 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 PLPP6Q8IY26 295 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 OR52N1Q8NH53 320 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 CHST8Q9H2A9 424 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 CYB5R1Q9UHQ9 305 aa12.47□□□□□ -0.41
LRRK1-202ENST00000525284 NID1P14543 1247 aa12.46□□□□□ -0.41
LRRK1-202ENST00000525284 ELOBQ15370 118 aa12.46□□□□□ -0.41
LRRK1-202ENST00000525284 TOMM34Q15785 309 aaPredicted RBP12.46□□□□□ -0.41
LRRK1-202ENST00000525284 SPRED1Q7Z699 444 aa12.46□□□□□ -0.41
LRRK1-202ENST00000525284 MAML2Q8IZL2 1156 aaPredicted RBP12.46□□□□□ -0.41
LRRK1-202ENST00000525284 GPX8Q8TED1 209 aa12.46□□□□□ -0.41
LRRK1-202ENST00000525284 EMC6Q9BV81 110 aa12.46□□□□□ -0.41
LRRK1-202ENST00000525284 TMEM265A0A087WTH1 108 aa12.46□□□□□ -0.41
LRRK1-202ENST00000525284 BCL2L11O43521 198 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms