RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 A0A1W2PPV4 95 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 C12orf71A8MTZ7 269 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 SMIM1B2RUZ4 78 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 HSBP1L1C9JCN9 74 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 H0YHG0 523 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 EIF3HO15372 352 aaKnown RBP eCLIP2.39□□□□□ -2.03
CSDE1-209ENST00000525132 RGS16O15492 202 aaPredicted RBP2.39□□□□□ -2.03
CSDE1-209ENST00000525132 PFKFB2O60825 505 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 KRT36O76013 467 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 NUDT14O95848 222 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 CLPTM1O96005 669 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 TRBC1P01850 177 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 MSMBP08118 114 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 TACSTD2P09758 323 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 OR9G9P0C7N8 305 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 PRKACBP22694 351 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 MT3P25713 68 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 TIMP3P35625 211 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 RFX3P48380 749 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 DAOAP59103 153 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 SLC35A2P78381 396 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 CDK16Q00536 496 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 IRF8Q02556 426 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 GUCY2DQ02846 1103 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 RAB40BQ12829 278 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 LAGE3Q14657 143 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 NDUFA9Q16795 377 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 ZNF829Q3KNS6 432 aaPredicted RBP2.39□□□□□ -2.03
CSDE1-209ENST00000525132 GLYR1Q49A26 553 aaPredicted RBP2.39□□□□□ -2.03
CSDE1-209ENST00000525132 SLC22A10Q63ZE4 541 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 FAM53AQ6NSI3 398 aaPredicted RBP2.39□□□□□ -2.03
CSDE1-209ENST00000525132 SPSB3Q6PJ21 355 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 ENPP6Q6UWR7 440 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 LRRC31Q6UY01 552 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 SCARA5Q6ZMJ2 495 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 PRSS48Q7RTY5 328 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 LINC00523Q86TU6 105 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 TPRA1Q86W33 373 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 IFNEQ86WN2 208 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 RNF130Q86XS8 419 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 ERI1Q8IV48 349 aaKnown RBP2.39□□□□□ -2.03
CSDE1-209ENST00000525132 MTURNQ8N3F0 131 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 RAB42Q8N4Z0 105 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 C15orf54Q8N8G6 183 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 SAMD12Q8N8I0 201 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 ZNRF1Q8ND25 227 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 OR52B6Q8NGF0 335 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 DTX3LQ8TDB6 740 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 CXorf40BQ96DE9 158 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 RAB3CQ96E17 227 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 OR5B2Q96R09 309 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 CLCC1Q96S66 551 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 CNN2Q99439 309 aaKnown RBP2.39□□□□□ -2.03
CSDE1-209ENST00000525132 PITX2Q99697 317 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 MAPKAP1Q9BPZ7 522 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 UTP23Q9BRU9 249 aaKnown RBP2.39□□□□□ -2.03
CSDE1-209ENST00000525132 RAB34Q9BZG1 259 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 PPA2Q9H2U2 334 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 GLIPR2Q9H4G4 154 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 SMYD3Q9H7B4 428 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 MRPS30Q9NP92 439 aaKnown RBP2.39□□□□□ -2.03
CSDE1-209ENST00000525132 CCNB1IP1Q9NPC3 277 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 B3GAT2Q9NPZ5 323 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 CUTCQ9NTM9 273 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 MTCH1Q9NZJ7 389 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 BFARQ9NZS9 450 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 CIDEBQ9UHD4 219 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 NUP50Q9UKX7 468 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 ICAM5Q9UMF0 924 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 PPP1R3CQ9UQK1 317 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 PDE10AQ9Y233 779 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 EXOGQ9Y2C4 368 aaKnown RBP2.39□□□□□ -2.03
CSDE1-209ENST00000525132 N6AMT1Q9Y5N5 214 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 PEX16Q9Y5Y5 336 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 GMEB1Q9Y692 573 aa2.39□□□□□ -2.03
CSDE1-209ENST00000525132 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
CSDE1-209ENST00000525132 PLSCR5A0PG75 271 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 OR6C74A6NCV1 312 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 CCDC182A6NF36 153 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 SMCO2A6NFE2 343 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 IFITM10A6NMD0 228 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 C15orf61A6NNL5 157 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 A8MUA0 341 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 K7ERQ8 282 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 PSMD11O00231 422 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 BMPR1BO00238 502 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 PIRO00625 290 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 GPAA1O43292 621 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 ZNF749O43361 778 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 RAMP1O60894 148 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 TBL1XO60907 577 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 SH3BGRLO75368 114 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 TMEM50AO95807 157 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 GNA14O95837 355 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 EPPINO95925 133 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 CRYAAP02489 173 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 CT62P0C5K7 136 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 STOMP27105 288 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 PDHA2P29803 388 aa2.38□□□□□ -2.03
CSDE1-209ENST00000525132 HMOX2P30519 316 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms