RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 KCNRGQ8N5I3 272 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 ZDHHC22Q8N966 263 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 RELL2Q8NC24 303 aaPredicted RBP9.85□□□□□ -0.83
HDAC9-228ENST00000524023 RNF138Q8WVD3 245 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 NUDCD2Q8WVJ2 157 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 MRPL13Q9BYD1 178 aaKnown RBP9.85□□□□□ -0.83
HDAC9-228ENST00000524023 SLC7A5P2Q9GIP4 190 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 CST11Q9H112 138 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 SLC25A32Q9H2D1 315 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 ZNF576Q9H609 170 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 B3GAT1Q9P2W7 334 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 GPR160Q9UJ42 338 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 TNFSF18Q9UNG2 199 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 SRPK3Q9UPE1 567 aa9.85□□□□□ -0.83
HDAC9-228ENST00000524023 RPH3AQ9Y2J0 694 aaPredicted RBP9.85□□□□□ -0.83
HDAC9-228ENST00000524023 ASCC3Q8N3C0 2202 aaKnown RBP9.85□□□□□ -0.83
HDAC9-228ENST00000524023 LOC100509620A0A075B734 347 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 D6RAR5 112 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 IL2RAP01589 272 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 GIMD1P0DJR0 217 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 HLA-GP17693 338 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 LAP3P28838 519 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 PPP1R1AQ13522 171 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 ZNF345Q14585 488 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 C11orf87Q6NUJ2 197 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 JMJD6Q6NYC1 403 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-228ENST00000524023 ZNF529Q6P280 563 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 SLC38A9Q8NBW4 561 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 OR5D14Q8NGL3 314 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 OR13C9Q8NGT0 318 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 SEC22AQ96IW7 307 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 PDCD10Q9BUL8 212 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 WDR13Q9H1Z4 485 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 KLRF1Q9NZS2 232 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 COMMD9Q9P000 198 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 PISDQ9UG56 409 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 ATXN7L1Q9ULK2 861 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-228ENST00000524023 SLC5A6Q9Y289 635 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 TRBV11-1A0A0K0K1C0 115 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 SCGNO76038 276 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 STK17BO94768 372 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 OR2F2O95006 317 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 GNB3P16520 340 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 RAB3AP20336 220 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 HRH1P35367 487 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 MYBPHQ13203 477 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 BTN1A1Q13410 526 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 OR2F1Q13607 317 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 TAF13Q15543 124 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 LRRC37A5PQ49AS3 106 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 THEM4Q5T1C6 240 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 CFAP77Q6ZQR2 320 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 RABEPKQ7Z6M1 372 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 STPG2Q8N412 459 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 PXT1Q8NFP0 134 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 MITD1Q8WV92 249 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 ST8SIA4Q92187 359 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 TMEM185BQ9H7F4 350 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 IFT46Q9NQC8 304 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 RASL12Q9NYN1 266 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 PPP4R1LQ9P1A2 415 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 FBLN5Q9UBX5 448 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 PLEKHA6Q9Y2H5 1048 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 LHFPL6Q9Y693 200 aa9.84□□□□□ -0.83
HDAC9-228ENST00000524023 KANTRA0A1W2PQU2 76 aa9.83□□□□□ -0.84
HDAC9-228ENST00000524023 C9orf170A2RU37 121 aa9.83□□□□□ -0.84
HDAC9-228ENST00000524023 TMEM14DPA8MWL7 114 aa9.83□□□□□ -0.84
HDAC9-228ENST00000524023 ZNF93P35789 620 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-228ENST00000524023 GSK3AP49840 483 aa9.83□□□□□ -0.84
HDAC9-228ENST00000524023 ZNF41P51814 821 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-228ENST00000524023 IL13RA1P78552 427 aa9.83□□□□□ -0.84
HDAC9-228ENST00000524023 PLPPR5Q32ZL2 321 aa9.83□□□□□ -0.84
HDAC9-228ENST00000524023 SLC25A53Q5H9E4 307 aa9.83□□□□□ -0.84
HDAC9-228ENST00000524023 AWAT2Q6E213 333 aa9.83□□□□□ -0.84
HDAC9-228ENST00000524023 TMPRSS9Q7Z410 1059 aa9.83□□□□□ -0.84
HDAC9-228ENST00000524023 ANGPTL5Q86XS5 388 aa9.83□□□□□ -0.84
HDAC9-228ENST00000524023 UEVLDQ8IX04 471 aa9.83□□□□□ -0.84
HDAC9-228ENST00000524023 DTWD2Q8NBA8 298 aa9.83□□□□□ -0.84
HDAC9-228ENST00000524023 ZBTB44Q8NCP5 570 aa9.83□□□□□ -0.84
HDAC9-228ENST00000524023 OR10R2Q8NGX6 335 aa9.83□□□□□ -0.84
HDAC9-228ENST00000524023 LHFPL5Q8TAF8 219 aa9.83□□□□□ -0.84
HDAC9-228ENST00000524023 POC1BQ8TC44 478 aa9.83□□□□□ -0.84
HDAC9-228ENST00000524023 OR51E1Q8TCB6 317 aa9.83□□□□□ -0.84
HDAC9-228ENST00000524023 PPP1R1CQ8WVI7 109 aa9.83□□□□□ -0.84
HDAC9-228ENST00000524023 MRGPRX4Q96LA9 322 aa9.83□□□□□ -0.84
HDAC9-228ENST00000524023 VRK1Q99986 396 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-228ENST00000524023 NUDT16L1Q9BRJ7 211 aaKnown RBP9.83□□□□□ -0.84
HDAC9-228ENST00000524023 SELENOIQ9C0D9 397 aa9.83□□□□□ -0.84
HDAC9-228ENST00000524023 MS4A7Q9GZW8 240 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-228ENST00000524023 KCNK7Q9Y2U2 307 aa9.83□□□□□ -0.84
HDAC9-228ENST00000524023 RNF222A6NCQ9 220 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 OR2AT4A6NND4 320 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 TSPAN4O14817 238 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 MBTPS2O43462 519 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 BCL2L11O43521 198 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 SSX5O60225 188 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 DCNP07585 359 aaKnown RBP9.82□□□□□ -0.84
HDAC9-228ENST00000524023 ERCC1P07992 297 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-228ENST00000524023 PGA4P0DJD7 388 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms