RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 CDH12P55289 794 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 UCP2P55851 309 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 VSNL1P62760 191 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 HSF2Q03933 536 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 BAMBIQ13145 260 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 OR1Q1Q15612 314 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 TBC1D28Q2M2D7 210 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 PCGF3Q3KNV8 242 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 GCNT6Q5T4J0 391 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 HHATQ5VTY9 493 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 C6orf89Q6UWU4 347 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 WDR88Q6ZMY6 472 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 SLC35D2Q76EJ3 337 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 SLC16A14Q7RTX9 510 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 PRSS45Q7RTY3 260 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 PIWIL3Q7Z3Z3 882 aaKnown RBP4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 PXKQ7Z7A4 578 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 ARMC8Q8IUR7 673 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 C10orf67Q8IYJ2 551 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 KIRREL3Q8IZU9 778 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 LRRC18Q8N456 261 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 DPP10Q8N608 796 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 RBM15BQ8NDT2 890 aaKnown RBP4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 OR4K5Q8NGD3 323 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 OR1J1Q8NGS3 322 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 OR5J2Q8NH18 312 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 ZNF519Q8TB69 540 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 ST7LQ8TDW4 575 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 TMEM54Q969K7 222 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 ELMOD3Q96FG2 381 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 SLC41A3Q96GZ6 507 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 BCL2L14Q9BZR8 327 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 LRMDAQ9H2I8 198 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 RAD21L1Q9H4I0 556 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 DENND2DQ9H6A0 471 aaPredicted RBP4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 ZNF696Q9H7X3 374 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 C12orf10Q9HB07 376 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 NTN4Q9HB63 628 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 BCL2L10Q9HD36 194 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 A4GALTQ9NPC4 353 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 PNRC2Q9NPJ4 139 aaKnown RBP4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 TMEM38BQ9NVV0 291 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 MRPL39Q9NYK5 338 aaKnown RBP4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 GLTPQ9NZD2 209 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 MSRB1Q9NZV6 116 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 OPN4Q9UHM6 478 aa4.42□□□□□ -1.7
CTNNA1-239ENST00000523685 IGLV3-9A0A075B6K5 115 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 A0A0B4J2E0 115 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 A0A1B0GX12 115 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 PLSCR5A0PG75 271 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 CPSF4LA6NMK7 179 aaKnown RBP4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 UBDO15205 165 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 TM9SF1O15321 606 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 HDAC3O15379 428 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 ENTPD5O75356 428 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 CH25HO95992 272 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 PTHP01270 115 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 IGHV1-46P01743 117 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 HIST1H2ABP04908 130 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 SBK2P0C263 348 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 ZCCHC18P0CG32 403 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 UMPSP11172 480 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 ETS2P15036 469 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 ZNF250P15622 560 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 OMGP23515 440 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 PRTN3P24158 256 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 MPV17P39210 176 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 ATP4BP51164 291 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 CDK6Q00534 326 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 SCARB2Q14108 478 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 MOGQ16653 247 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 SLC36A2Q495M3 483 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 MMEL1Q495T6 779 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 SPRNQ5BIV9 151 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 THEM4Q5T1C6 240 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 FAM91A1Q658Y4 838 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 REEP3Q6NUK4 255 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 LEG1Q6P5S2 330 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 DHRS4L2Q6PKH6 230 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 HIST3H2AQ7L7L0 130 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 RANBP3LQ86VV4 465 aaPredicted RBP4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 LRRC17Q8N6Y2 441 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 LSMEM1Q8N8F7 131 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 SMYD1Q8NB12 490 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 SYT14Q8NB59 555 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 OR1J2Q8NGS2 313 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 OR6X1Q8NH79 312 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 GEMIN6Q8WXD5 167 aaKnown RBP4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 GTF2H4Q92759 462 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 HIST1H2ACQ93077 130 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 SLC35B4Q969S0 331 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 OR52B2Q96RD2 323 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 MCHR1Q99705 422 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 WFDC6Q9BQY6 131 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 RSPO3Q9BXY4 272 aaPredicted RBP4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 KCNN2Q9H2S1 579 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 C1orf198Q9H425 327 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 CCNB1IP1Q9NPC3 277 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 MMP26Q9NRE1 261 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms