RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	N4BP1	O75113	896 aa	Known RBP	3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	SERPINB7	O75635	380 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	SC5D	O75845	299 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	OR2J3	O76001	311 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	GJB5	O95377	273 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	NBEAP1	P0C6P0	100 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	CT45A10	P0DMU9	189 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	GFAP	P14136	432 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	ATP1B2	P14415	290 aa	Predicted RBP	3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	BGN	P21810	368 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	CXCR2	P25025	360 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	HTR2C	P28335	458 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	PCK1	P35558	622 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	NUDT1	P36639	197 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	FGF8	P55075	233 aa	Predicted RBP	3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	GPNMB	Q14956	572 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	KCTD19	Q17RG1	926 aa	Predicted RBP	3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	SLC36A2	Q495M3	483 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	AKIRIN2	Q53H80	203 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	SYPL2	Q5VXT5	272 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	UFSP1	Q6NVU6	142 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	FAM71F2	Q6NXP2	309 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	ULK3	Q6PHR2	472 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	SPESP1	Q6UW49	350 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	STAC2	Q6ZMT1	411 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	FAM92B	Q6ZTR7	304 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	H2BFWT	Q7Z2G1	175 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	HDDC2	Q7Z4H3	204 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	PHF13	Q86YI8	300 aa	Predicted RBP	3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	CALHM1	Q8IU99	346 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	LINC01561	Q8N1V8	128 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	C2orf73	Q8N5S3	287 aa	Predicted RBP	3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	RHOXF1	Q8NHV9	184 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	LGALS14	Q8TCE9	139 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	FAM3C	Q92520	227 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	PINX1	Q96BK5	328 aa	Known RBP	3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	HPDL	Q96IR7	371 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	RNF170	Q96K19	258 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	C9orf85	Q96MD7	179 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	AMDHD1	Q96NU7	426 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	ZIM3	Q96PE6	472 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	SLC38A2	Q96QD8	506 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	EBNA1BP2	Q99848	306 aa	Known RBP	3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	HOPX	Q9BPY8	73 aa	Predicted RBP	3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	DCUN1D5	Q9BTE7	237 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	TMEM109	Q9BVC6	243 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	TIPIN	Q9BVW5	301 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	DDA1	Q9BW61	102 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	NMUR2	Q9GZQ4	415 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	PCBD2	Q9H0N5	130 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	PLEKHA1	Q9HB21	404 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	PLGRKT	Q9HBL7	147 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	ANKH	Q9HCJ1	492 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	ABCB9	Q9NP78	766 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	MIEF1	Q9NQG6	463 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	IMPAD1	Q9NX62	359 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	KLRF1	Q9NZS2	232 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	CCDC59	Q9P031	241 aa	Known RBP	3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	ZNF282	Q9UDV7	671 aa	Predicted RBP	3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	PSG11	Q9UQ72	335 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	POLR3H	Q9Y535	204 aa	Predicted RBP	3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	MED1	Q15648	1581 aa	Predicted RBP	3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	WNK3	Q9BYP7	1800 aa		3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	KTN1	Q86UP2	1357 aa	Known RBP	3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	COL22A1	Q8NFW1	1626 aa	Predicted RBP	3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	IBTK	Q9P2D0	1353 aa	Predicted RBP	3.37	□□□□□ -1.87
CTNNA1-238	ENST00000523298	ANKAR	Q7Z5J8	1434 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	PXDN	Q92626	1479 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298		A0A1B0GTI1	187 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	KBTBD11-OT1	A0A1B0GTJ5	212 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298		A6NIZ1	184 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	RFPL4A	A6NLU0	287 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	RFPL4AL1	F8VTS6	287 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	hCG_2039718	K7EN88	272 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	ARPC5	O15511	151 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	PPIH	O43447	177 aa	Known RBP	3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	AIRE	O43918	545 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	FADS1	O60427	444 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	RAMP3	O60896	148 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	SCGN	O76038	276 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	SRP72	O76094	671 aa	Known RBP	3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	LDOC1	O95751	146 aa	Predicted RBP	3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	SERPINA1	P01009	418 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	PPBP	P02775	128 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	GAPDH	P04406	335 aa	Known RBP	3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	SNRPC	P09234	159 aa	Known RBP	3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	ADRB3	P13945	408 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	MDH2	P40926	338 aa	Known RBP	3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	SLCO1A2	P46721	670 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	IDH2	P48735	452 aa	Known RBP	3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	CYB561	P49447	251 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	TMED10	P49755	219 aa	Known RBP	3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	XK	P51811	444 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	PRKX	P51817	358 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	ACLY	P53396	1101 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	MRPS22	P82650	360 aa	Known RBP	3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	VLDLR	P98155	873 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	ZNF45	Q02386	682 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	CYTH1	Q15438	398 aa		3.36	□□□□□ -1.87
CTNNA1-238	ENST00000523298	WHAMMP3	Q1A5X7	153 aa		3.36	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms