RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 C6orf52Q5T4I8 152 aa15.15■□□□□ 0.02
CLK4-211ENST00000522556 C1orf174Q8IYL3 243 aa15.15■□□□□ 0.02
CLK4-211ENST00000522556 OR10AD1Q8NGE0 317 aa15.15■□□□□ 0.02
CLK4-211ENST00000522556 DNAJC9Q8WXX5 260 aa15.15■□□□□ 0.02
CLK4-211ENST00000522556 CENPNQ96H22 339 aaPredicted RBP15.15■□□□□ 0.02
CLK4-211ENST00000522556 SAP30LQ9HAJ7 183 aa15.15■□□□□ 0.02
CLK4-211ENST00000522556 DYSFO75923 2080 aa15.14■□□□□ 0.01
CLK4-211ENST00000522556 IGHV1-69-2A0A0G2JMI3 117 aa15.14■□□□□ 0.01
CLK4-211ENST00000522556 IGHV3-64DA0A0J9YX35 117 aa15.14■□□□□ 0.01
CLK4-211ENST00000522556 ZAR1LA6NP61 321 aa15.14■□□□□ 0.01
CLK4-211ENST00000522556 ADH4P08319 380 aa15.14■□□□□ 0.01
CLK4-211ENST00000522556 MRPL3P09001 348 aaKnown RBP15.14■□□□□ 0.01
CLK4-211ENST00000522556 TACSTD2P09758 323 aa15.14■□□□□ 0.01
CLK4-211ENST00000522556 RAC2P15153 192 aa15.14■□□□□ 0.01
CLK4-211ENST00000522556 IGFBP5P24593 272 aa15.14■□□□□ 0.01
CLK4-211ENST00000522556 CDK5R2Q13319 367 aa15.14■□□□□ 0.01
CLK4-211ENST00000522556 PCGF3Q3KNV8 242 aa15.14■□□□□ 0.01
CLK4-211ENST00000522556 GLYATL3Q5SZD4 288 aa15.14■□□□□ 0.01
CLK4-211ENST00000522556 SLX4IPQ5VYV7 408 aa15.14■□□□□ 0.01
CLK4-211ENST00000522556 C12orf73Q69YU5 71 aa15.14■□□□□ 0.01
CLK4-211ENST00000522556 OR2Z1Q8NG97 314 aa15.14■□□□□ 0.01
CLK4-211ENST00000522556 MSI2Q96DH6 328 aaKnown RBP15.14■□□□□ 0.01
CLK4-211ENST00000522556 PLEKHA8Q96JA3 519 aa15.14■□□□□ 0.01
CLK4-211ENST00000522556 DECR2Q9NUI1 292 aa15.14■□□□□ 0.01
CLK4-211ENST00000522556 N6AMT1Q9Y5N5 214 aa15.14■□□□□ 0.01
CLK4-211ENST00000522556 PRR32B1ATL7 298 aa15.13■□□□□ 0.01
CLK4-211ENST00000522556 ZNF878C9JN71 531 aa15.13■□□□□ 0.01
CLK4-211ENST00000522556 J3QW42 95 aa15.13■□□□□ 0.01
CLK4-211ENST00000522556 MLNRO43193 412 aa15.13■□□□□ 0.01
CLK4-211ENST00000522556 PPIHO43447 177 aaKnown RBP15.13■□□□□ 0.01
CLK4-211ENST00000522556 MT-ND5P03915 603 aa15.13■□□□□ 0.01
CLK4-211ENST00000522556 SELEP16581 610 aa15.13■□□□□ 0.01
CLK4-211ENST00000522556 CRYBB2P43320 205 aa15.13■□□□□ 0.01
CLK4-211ENST00000522556 GPR6P46095 362 aaPredicted RBP15.13■□□□□ 0.01
CLK4-211ENST00000522556 TPTEP56180 551 aa15.13■□□□□ 0.01
CLK4-211ENST00000522556 RPS7P62081 194 aaKnown RBP15.13■□□□□ 0.01
CLK4-211ENST00000522556 ESRRGP62508 458 aa15.13■□□□□ 0.01
CLK4-211ENST00000522556 TNFAIP6P98066 277 aaPredicted RBP15.13■□□□□ 0.01
CLK4-211ENST00000522556 MVKQ03426 396 aa15.13■□□□□ 0.01
CLK4-211ENST00000522556 ZNF92Q03936 586 aa15.13■□□□□ 0.01
CLK4-211ENST00000522556 MOGQ16653 247 aa15.13■□□□□ 0.01
CLK4-211ENST00000522556 FAM209AQ5JX71 171 aa15.13■□□□□ 0.01
CLK4-211ENST00000522556 ZNF771Q7L3S4 317 aaPredicted RBP15.13■□□□□ 0.01
CLK4-211ENST00000522556 RFLNBQ8N5W9 214 aa15.13■□□□□ 0.01
CLK4-211ENST00000522556 CLDND2Q8NHS1 167 aa15.13■□□□□ 0.01
CLK4-211ENST00000522556 ITLN1Q8WWA0 313 aa15.13■□□□□ 0.01
CLK4-211ENST00000522556 ELMOD3Q96FG2 381 aa15.13■□□□□ 0.01
CLK4-211ENST00000522556 OSBPL10Q9BXB5 764 aa15.13■□□□□ 0.01
CLK4-211ENST00000522556 TTTY10Q9BZA0 68 aa15.13■□□□□ 0.01
CLK4-211ENST00000522556 DNAJC27Q9NZQ0 273 aa15.13■□□□□ 0.01
CLK4-211ENST00000522556 NAV3Q8IVL0 2385 aa15.13■□□□□ 0.01
CLK4-211ENST00000522556 NIPBLQ6KC79 2804 aaeCLIP15.12■□□□□ 0.01
CLK4-211ENST00000522556 PRODHO43272 600 aa15.12■□□□□ 0.01
CLK4-211ENST00000522556 HLA-DPB1P04440 258 aa15.12■□□□□ 0.01
CLK4-211ENST00000522556 CD55P08174 381 aa15.12■□□□□ 0.01
CLK4-211ENST00000522556 CX3CR1P49238 355 aa15.12■□□□□ 0.01
CLK4-211ENST00000522556 BLVRAP53004 296 aa15.12■□□□□ 0.01
CLK4-211ENST00000522556 MRPS11P82912 194 aaKnown RBP15.12■□□□□ 0.01
CLK4-211ENST00000522556 EFNB1P98172 346 aa15.12■□□□□ 0.01
CLK4-211ENST00000522556 TCEANCQ8N8B7 351 aa15.12■□□□□ 0.01
CLK4-211ENST00000522556 OR5L1Q8NGL2 311 aa15.12■□□□□ 0.01
CLK4-211ENST00000522556 RNF133Q8WVZ7 376 aa15.12■□□□□ 0.01
CLK4-211ENST00000522556 SPTSSAQ969W0 71 aa15.12■□□□□ 0.01
CLK4-211ENST00000522556 IL4I1Q96RQ9 567 aa15.12■□□□□ 0.01
CLK4-211ENST00000522556 KCNJ15Q99712 375 aa15.12■□□□□ 0.01
CLK4-211ENST00000522556 RIBC2Q9H4K1 309 aa15.12■□□□□ 0.01
CLK4-211ENST00000522556 CYSLTR2Q9NS75 346 aa15.12■□□□□ 0.01
CLK4-211ENST00000522556 ZNF319Q9P2F9 582 aa15.12■□□□□ 0.01
CLK4-211ENST00000522556 CGGBP1Q9UFW8 167 aaPredicted RBP15.12■□□□□ 0.01
CLK4-211ENST00000522556 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.11■□□□□ 0.013e-9■■■■□ 25.8
CLK4-211ENST00000522556 IQCF6A8MYZ5 107 aa15.11■□□□□ 0.01
CLK4-211ENST00000522556 EI24O14681 340 aa15.11■□□□□ 0.01
CLK4-211ENST00000522556 TUBG1P23258 451 aa15.11■□□□□ 0.01
CLK4-211ENST00000522556 OPRL1P41146 370 aa15.11■□□□□ 0.01
CLK4-211ENST00000522556 TAF13Q15543 124 aa15.11■□□□□ 0.01
CLK4-211ENST00000522556 CYB5R2Q6BCY4 276 aa15.11■□□□□ 0.01
CLK4-211ENST00000522556 DRAM2Q6UX65 266 aa15.11■□□□□ 0.01
CLK4-211ENST00000522556 PRSS45Q7RTY3 260 aa15.11■□□□□ 0.01
CLK4-211ENST00000522556 ZNF283Q8N7M2 679 aa15.11■□□□□ 0.01
CLK4-211ENST00000522556 ZNF540Q8NDQ6 660 aa15.11■□□□□ 0.01
CLK4-211ENST00000522556 OR8G5Q8NG78 346 aa15.11■□□□□ 0.01
CLK4-211ENST00000522556 OTOSQ8NHW6 89 aa15.11■□□□□ 0.01
CLK4-211ENST00000522556 CCL17Q92583 94 aa15.11■□□□□ 0.01
CLK4-211ENST00000522556 DVL3Q92997 716 aaPredicted RBP15.11■□□□□ 0.01
CLK4-211ENST00000522556 COG8Q96MW5 612 aa15.11■□□□□ 0.01
CLK4-211ENST00000522556 GABARAPL3Q9BY60 117 aa15.11■□□□□ 0.01
CLK4-211ENST00000522556 TUBG2Q9NRH3 451 aa15.11■□□□□ 0.01
CLK4-211ENST00000522556 ZDHHC8Q9ULC8 765 aa15.11■□□□□ 0.01
CLK4-211ENST00000522556 COPS3Q9UNS2 423 aa15.11■□□□□ 0.01
CLK4-211ENST00000522556 WIPI2Q9Y4P8 454 aa15.11■□□□□ 0.01
CLK4-211ENST00000522556 FAM157AC9JC47 383 aa15.1■□□□□ 0.01
CLK4-211ENST00000522556 F5H5P2 479 aa15.1■□□□□ 0.01
CLK4-211ENST00000522556 PSMD9O00233 223 aa15.1■□□□□ 0.01
CLK4-211ENST00000522556 TLX2O43763 284 aaPredicted RBP15.1■□□□□ 0.01
CLK4-211ENST00000522556 LIPAP38571 399 aa15.1■□□□□ 0.01
CLK4-211ENST00000522556 CHN2P52757 468 aa15.1■□□□□ 0.01
CLK4-211ENST00000522556 ZNF121P58317 390 aaPredicted RBP15.1■□□□□ 0.01
CLK4-211ENST00000522556 HOXA4Q00056 320 aaPredicted RBP15.1■□□□□ 0.01
CLK4-211ENST00000522556 SLC35D3Q5M8T2 416 aa15.1■□□□□ 0.01
CLK4-211ENST00000522556 LRRN1Q6UXK5 716 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms