RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 OR10S1Q8NGN2 331 aa17.39■□□□□ 0.37
SDCBP-209ENST00000522243 TSSK6Q9BXA6 273 aa17.39■□□□□ 0.37
SDCBP-209ENST00000522243 TRIM15Q9C019 465 aa17.39■□□□□ 0.37
SDCBP-209ENST00000522243 TMEM100Q9NV29 134 aa17.39■□□□□ 0.37
SDCBP-209ENST00000522243 IL20Q9NYY1 176 aa17.39■□□□□ 0.37
SDCBP-209ENST00000522243 U3KQV3 271 aa17.39■□□□□ 0.37
SDCBP-209ENST00000522243 CEACAM18A8MTB9 384 aa17.38■□□□□ 0.37
SDCBP-209ENST00000522243 F5H0A9 414 aaPredicted RBP17.38■□□□□ 0.37
SDCBP-209ENST00000522243 SOX14O95416 240 aa17.38■□□□□ 0.37
SDCBP-209ENST00000522243 TPTEP56180 551 aa17.38■□□□□ 0.37
SDCBP-209ENST00000522243 FAM201AQ5SY85 155 aa17.38■□□□□ 0.37
SDCBP-209ENST00000522243 ZNF362Q5T0B9 420 aaPredicted RBP17.38■□□□□ 0.37
SDCBP-209ENST00000522243 DHFR2Q86XF0 187 aa17.38■□□□□ 0.37
SDCBP-209ENST00000522243 BPIFB2Q8N4F0 458 aa17.38■□□□□ 0.37
SDCBP-209ENST00000522243 LINC00471Q8N535 108 aa17.38■□□□□ 0.37
SDCBP-209ENST00000522243 DEFB108BQ8NET1 73 aa17.38■□□□□ 0.37
SDCBP-209ENST00000522243 OR2T4Q8NH00 348 aa17.38■□□□□ 0.37
SDCBP-209ENST00000522243 PPIAL4EA0A075B759 164 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 PPIAL4CA0A0B4J2A2 164 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 PPIAL4DF5H284 164 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 M0R135 149 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 GYPBP06028 91 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 PPIAL4FP0DN26 164 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 ANOS1P23352 680 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 PMELP40967 661 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 ACTG1P63261 375 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 MALLQ13021 153 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 ZNF154Q13106 437 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 CRMP1Q14194 572 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 ESCO2Q56NI9 601 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 LCN8Q6JVE9 175 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 USP43Q70EL4 1123 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 PGAP1Q75T13 922 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 MUC20Q8N307 709 aaPredicted RBP17.37■□□□□ 0.37
SDCBP-209ENST00000522243 OR4Q3Q8NH05 313 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 ZFAND2BQ8WV99 257 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 ZNF799Q96GE5 643 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 SUCNR1Q9BXA5 334 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 TMEM165Q9HC07 324 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 ARMC1Q9NVT9 282 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 KCNG2Q9UJ96 466 aa17.37■□□□□ 0.37
SDCBP-209ENST00000522243 SAMHD1Q9Y3Z3 626 aaKnown RBP17.37■□□□□ 0.37
SDCBP-209ENST00000522243 C5orf63A6NC05 138 aa17.36■□□□□ 0.37
SDCBP-209ENST00000522243 TRIM77I1YAP6 450 aa17.36■□□□□ 0.37
SDCBP-209ENST00000522243 FSHBP01225 129 aa17.36■□□□□ 0.37
SDCBP-209ENST00000522243 WNT2P09544 360 aa17.36■□□□□ 0.37
SDCBP-209ENST00000522243 ZNF12P17014 697 aa17.36■□□□□ 0.37
SDCBP-209ENST00000522243 TRIM25Q14258 630 aaKnown RBP17.36■□□□□ 0.37
SDCBP-209ENST00000522243 SNAI3Q3KNW1 292 aa17.36■□□□□ 0.37
SDCBP-209ENST00000522243 OR2T5Q6IEZ7 315 aa17.36■□□□□ 0.37
SDCBP-209ENST00000522243 MRPL21Q7Z2W9 205 aaKnown RBP17.36■□□□□ 0.37
SDCBP-209ENST00000522243 DCXRQ7Z4W1 244 aa17.36■□□□□ 0.37
SDCBP-209ENST00000522243 LNX2Q8N448 690 aa17.36■□□□□ 0.37
SDCBP-209ENST00000522243 ZNF511Q8NB15 262 aa17.36■□□□□ 0.37
SDCBP-209ENST00000522243 OR2T29Q8NH02 315 aa17.36■□□□□ 0.37
SDCBP-209ENST00000522243 SPTSSAQ969W0 71 aa17.36■□□□□ 0.37
SDCBP-209ENST00000522243 MAGIXQ9H6Y5 334 aa17.36■□□□□ 0.37
SDCBP-209ENST00000522243 REEP1Q9H902 201 aa17.36■□□□□ 0.37
SDCBP-209ENST00000522243 POLR3KQ9Y2Y1 108 aaPredicted RBP17.36■□□□□ 0.37
SDCBP-209ENST00000522243 INSIG2Q9Y5U4 225 aa17.36■□□□□ 0.37
SDCBP-209ENST00000522243 AUP1Q9Y679 476 aa17.36■□□□□ 0.37
SDCBP-209ENST00000522243 COMMD3-BMI1R4GMX3 469 aa17.36■□□□□ 0.37
SDCBP-209ENST00000522243 A8MXK9 166 aa17.35■□□□□ 0.37
SDCBP-209ENST00000522243 IFNL4K9M1U5 179 aa17.35■□□□□ 0.37
SDCBP-209ENST00000522243 SPARCP09486 303 aa17.35■□□□□ 0.37
SDCBP-209ENST00000522243 CLUP10909 449 aa17.35■□□□□ 0.37
SDCBP-209ENST00000522243 RPS2P15880 293 aaKnown RBP17.35■□□□□ 0.37
SDCBP-209ENST00000522243 MAB21L1Q13394 359 aa17.35■□□□□ 0.37
SDCBP-209ENST00000522243 MICAQ29983 383 aa17.35■□□□□ 0.37
SDCBP-209ENST00000522243 FAM98BQ52LJ0 330 aaKnown RBP17.35■□□□□ 0.37
SDCBP-209ENST00000522243 ARMCX4Q5H9R4 360 aa17.35■□□□□ 0.37
SDCBP-209ENST00000522243 PRAMEF6Q5VXH4 476 aa17.35■□□□□ 0.37
SDCBP-209ENST00000522243 ARHGAP24Q8N264 748 aa17.35■□□□□ 0.37
SDCBP-209ENST00000522243 C19orf18Q8NEA5 215 aa17.35■□□□□ 0.37
SDCBP-209ENST00000522243 OR2AE1Q8NHA4 323 aa17.35■□□□□ 0.37
SDCBP-209ENST00000522243 SPRYD4Q8WW59 207 aaPredicted RBP17.35■□□□□ 0.37
SDCBP-209ENST00000522243 CLPTM1LQ96KA5 538 aa17.35■□□□□ 0.37
SDCBP-209ENST00000522243 JMJD8Q96S16 334 aa17.35■□□□□ 0.37
SDCBP-209ENST00000522243 MUC13Q9H3R2 512 aa17.35■□□□□ 0.37
SDCBP-209ENST00000522243 CENPMQ9NSP4 180 aa17.35■□□□□ 0.37
SDCBP-209ENST00000522243 UFSP2Q9NUQ7 469 aa17.35■□□□□ 0.37
SDCBP-209ENST00000522243 N6AMT1Q9Y5N5 214 aa17.35■□□□□ 0.37
SDCBP-209ENST00000522243 T-ENOLP0DO92 83 aa17.34■□□□□ 0.37
SDCBP-209ENST00000522243 CALB2P22676 271 aa17.34■□□□□ 0.37
SDCBP-209ENST00000522243 FPR2P25090 351 aa17.34■□□□□ 0.37
SDCBP-209ENST00000522243 FMO3P31513 532 aa17.34■□□□□ 0.37
SDCBP-209ENST00000522243 PRKXP51817 358 aa17.34■□□□□ 0.37
SDCBP-209ENST00000522243 ZNF92Q03936 586 aa17.34■□□□□ 0.37
SDCBP-209ENST00000522243 SPATC1Q76KD6 591 aa17.34■□□□□ 0.37
SDCBP-209ENST00000522243 KLBQ86Z14 1044 aa17.34■□□□□ 0.37
SDCBP-209ENST00000522243 CCDC197Q8NCU1 140 aa17.34■□□□□ 0.37
SDCBP-209ENST00000522243 POP5Q969H6 163 aaKnown RBP17.34■□□□□ 0.37
SDCBP-209ENST00000522243 CCDC124Q96CT7 223 aaKnown RBP17.34■□□□□ 0.37
SDCBP-209ENST00000522243 TMEM246Q9BRR3 403 aa17.34■□□□□ 0.37
SDCBP-209ENST00000522243 COPS4Q9BT78 406 aa17.34■□□□□ 0.37
SDCBP-209ENST00000522243 MRI1Q9BV20 369 aa17.34■□□□□ 0.37
SDCBP-209ENST00000522243 RBM4Q9BWF3 364 aaKnown RBP17.34■□□□□ 0.37
SDCBP-209ENST00000522243 SSBP3Q9BWW4 388 aaPredicted RBP17.34■□□□□ 0.37
SDCBP-209ENST00000522243 ESM1Q9NQ30 184 aa17.34■□□□□ 0.37
SDCBP-209ENST00000522243 DDX28Q9NUL7 540 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms