RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 SNX33Q8WV41 574 aa14.97□□□□□ -0.01
TRAM1-203ENST00000520700 MRPL24Q96A35 216 aaKnown RBP14.97□□□□□ -0.01
TRAM1-203ENST00000520700 CNBD2Q96M20 576 aa14.97□□□□□ -0.01
TRAM1-203ENST00000520700 TBX5Q99593 518 aa14.97□□□□□ -0.01
TRAM1-203ENST00000520700 YTHDF1Q9BYJ9 559 aaKnown RBP14.97□□□□□ -0.01
TRAM1-203ENST00000520700 DUSP21Q9H596 190 aa14.97□□□□□ -0.01
TRAM1-203ENST00000520700 ERVK13-1Q9NX77 482 aa14.97□□□□□ -0.01
TRAM1-203ENST00000520700 IKZF2Q9UKS7 526 aa14.97□□□□□ -0.01
TRAM1-203ENST00000520700 EXOSC1Q9Y3B2 195 aaKnown RBP14.97□□□□□ -0.01
TRAM1-203ENST00000520700 TPRKBQ9Y3C4 175 aa14.97□□□□□ -0.01
TRAM1-203ENST00000520700 RAI1Q7Z5J4 1906 aaPredicted RBP14.97□□□□□ -0.01
TRAM1-203ENST00000520700 APCP25054 2843 aa14.96□□□□□ -0.01
TRAM1-203ENST00000520700 B9A039 149 aa14.96□□□□□ -0.01
TRAM1-203ENST00000520700 FAM20BO75063 409 aa14.96□□□□□ -0.01
TRAM1-203ENST00000520700 LCATP04180 440 aa14.96□□□□□ -0.01
TRAM1-203ENST00000520700 LCKP06239 509 aa14.96□□□□□ -0.01
TRAM1-203ENST00000520700 OR4A8P0C604 315 aa14.96□□□□□ -0.01
TRAM1-203ENST00000520700 LIMS3P0CW19 117 aa14.96□□□□□ -0.01
TRAM1-203ENST00000520700 LIMS4P0CW20 117 aa14.96□□□□□ -0.01
TRAM1-203ENST00000520700 MED21Q13503 144 aa14.96□□□□□ -0.01
TRAM1-203ENST00000520700 MSMPQ1L6U9 139 aa14.96□□□□□ -0.01
TRAM1-203ENST00000520700 SWI5Q1ZZU3 235 aa14.96□□□□□ -0.01
TRAM1-203ENST00000520700 MST1LQ2TV78 715 aa14.96□□□□□ -0.01
TRAM1-203ENST00000520700 RBM48Q5RL73 367 aaKnown RBP14.96□□□□□ -0.01
TRAM1-203ENST00000520700 AGAP6Q5VW22 663 aa14.96□□□□□ -0.01
TRAM1-203ENST00000520700 MUC15Q8N387 334 aa14.96□□□□□ -0.01
TRAM1-203ENST00000520700 HAVCR2Q8TDQ0 301 aa14.96□□□□□ -0.01
TRAM1-203ENST00000520700 SPSB4Q96A44 273 aa14.96□□□□□ -0.01
TRAM1-203ENST00000520700 HAVCR1Q96D42 359 aa14.96□□□□□ -0.01
TRAM1-203ENST00000520700 UBAP1Q9NZ09 502 aa14.96□□□□□ -0.01
TRAM1-203ENST00000520700 SPG11Q96JI7 2443 aa14.96□□□□□ -0.01
TRAM1-203ENST00000520700 TMEM269A0A1B0GVZ9 245 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 TMEM129A0AVI4 362 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 CD8AP01732 235 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 IGHV3-13P01766 116 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 RAC2P15153 192 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 CRHBPP24387 322 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 SLC6A9P48067 706 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 ZNF121P58317 390 aaPredicted RBP14.95□□□□□ -0.02
TRAM1-203ENST00000520700 SELENOVP59797 346 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 SLC35A2P78381 396 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 MRPL28Q13084 256 aaKnown RBP14.95□□□□□ -0.02
TRAM1-203ENST00000520700 MOGQ16653 247 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 ZNF829Q3KNS6 432 aaPredicted RBP14.95□□□□□ -0.02
TRAM1-203ENST00000520700 LIPNQ5VXI9 398 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 FDX2Q6P4F2 183 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 LHFPL3Q86UP9 236 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 ZNF540Q8NDQ6 660 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 SYNPRQ8TBG9 265 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 SLC25A40Q8TBP6 338 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 KLF14Q8TD94 323 aaPredicted RBP14.95□□□□□ -0.02
TRAM1-203ENST00000520700 MYDGFQ969H8 173 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 TRAF4Q9BUZ4 470 aaPredicted RBP14.95□□□□□ -0.02
TRAM1-203ENST00000520700 OR2J1Q9GZK6 312 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 PLK3Q9H4B4 646 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 RGCCQ9H4X1 137 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 OPA3Q9H6K4 179 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 MOB1AQ9H8S9 216 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 UBTD1Q9HAC8 227 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 CBLN4Q9NTU7 201 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 FAM206AQ9NX38 181 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 ZNF391Q9UJN7 358 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 CAB39Q9Y376 341 aaPredicted RBP14.95□□□□□ -0.02
TRAM1-203ENST00000520700 R4GMQ9 66 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 ABCA12Q86UK0 2595 aa14.95□□□□□ -0.02
TRAM1-203ENST00000520700 PSMD9O00233 223 aa14.94□□□□□ -0.02
TRAM1-203ENST00000520700 MAGEB4O15481 346 aaPredicted RBP14.94□□□□□ -0.02
TRAM1-203ENST00000520700 XRCC2O43543 280 aa14.94□□□□□ -0.02
TRAM1-203ENST00000520700 ADRA2AP08913 450 aa14.94□□□□□ -0.02
TRAM1-203ENST00000520700 KITLGP21583 273 aa14.94□□□□□ -0.02
TRAM1-203ENST00000520700 ERVS71-1P61550 626 aa14.94□□□□□ -0.02
TRAM1-203ENST00000520700 MALLQ13021 153 aa14.94□□□□□ -0.02
TRAM1-203ENST00000520700 C11orf71Q6IPW1 123 aa14.94□□□□□ -0.02
TRAM1-203ENST00000520700 VHLLQ6RSH7 139 aa14.94□□□□□ -0.02
TRAM1-203ENST00000520700 PAMR1Q6UXH9 720 aa14.94□□□□□ -0.02
TRAM1-203ENST00000520700 YIPF7Q8N8F6 280 aa14.94□□□□□ -0.02
TRAM1-203ENST00000520700 RNF166Q96A37 237 aaPredicted RBP14.94□□□□□ -0.02
TRAM1-203ENST00000520700 SIGLEC11Q96RL6 698 aa14.94□□□□□ -0.02
TRAM1-203ENST00000520700 RHNO1Q9BSD3 238 aa14.94□□□□□ -0.02
TRAM1-203ENST00000520700 ALG8Q9BVK2 526 aa14.94□□□□□ -0.02
TRAM1-203ENST00000520700 REPIN1Q9BWE0 567 aaKnown RBP14.94□□□□□ -0.02
TRAM1-203ENST00000520700 CDCA4Q9BXL8 241 aa14.94□□□□□ -0.02
TRAM1-203ENST00000520700 MRPL37Q9BZE1 423 aaKnown RBP14.94□□□□□ -0.02
TRAM1-203ENST00000520700 NUFIP1Q9UHK0 495 aaKnown RBP14.94□□□□□ -0.02
TRAM1-203ENST00000520700 PCDHGB5Q9Y5G0 923 aa14.94□□□□□ -0.02
TRAM1-203ENST00000520700 TACC2O95359 2948 aa14.94□□□□□ -0.02
TRAM1-203ENST00000520700 ITPR2Q14571 2701 aa14.93□□□□□ -0.02
TRAM1-203ENST00000520700 A0A0U1RQV5 110 aa14.93□□□□□ -0.02
TRAM1-203ENST00000520700 OVOL3O00110 214 aa14.93□□□□□ -0.02
TRAM1-203ENST00000520700 PNPP00491 289 aa14.93□□□□□ -0.02
TRAM1-203ENST00000520700 CDK1P06493 297 aa14.93□□□□□ -0.02
TRAM1-203ENST00000520700 SOD3P08294 240 aa14.93□□□□□ -0.02
TRAM1-203ENST00000520700 MYL12AP19105 171 aa14.93□□□□□ -0.02
TRAM1-203ENST00000520700 CFL1P23528 166 aaKnown RBP14.93□□□□□ -0.02
TRAM1-203ENST00000520700 GCH1P30793 250 aa14.93□□□□□ -0.02
TRAM1-203ENST00000520700 ETV1P50549 477 aa14.93□□□□□ -0.02
TRAM1-203ENST00000520700 KLF3P57682 345 aaPredicted RBP14.93□□□□□ -0.02
TRAM1-203ENST00000520700 OR12D2P58182 307 aa14.93□□□□□ -0.02
TRAM1-203ENST00000520700 SNAI3Q3KNW1 292 aa14.93□□□□□ -0.02
TRAM1-203ENST00000520700 AHSA2Q719I0 299 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms