RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 PIGCQ92535 297 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 SLC25A38Q96DW6 304 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 SGCZQ96LD1 299 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 PRRT1Q99946 306 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 PIGLQ9Y2B2 252 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 POM121CA8CG34 1229 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 ZNF850A8MQ14 1090 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 VAMP5O95183 116 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 SPDEFO95238 335 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 SFTPBP07988 381 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 PNLIPP16233 465 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 DSCR4P56555 118 aaPredicted RBP9.05□□□□□ -0.96
MCF2-209ENST00000520602 RAP2BP61225 183 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 PLP2Q04941 152 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 FHL1Q13642 323 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 ABCA11PQ4W5N1 156 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 DHRS13Q6UX07 377 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 FJX1Q86VR8 437 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 OR11G2Q8NGC1 345 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 OR5T2Q8NGG2 359 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 OR4K15Q8NH41 348 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 KCNG3Q8TAE7 436 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 ZNF524Q96C55 264 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 CCDC120Q96HB5 630 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 TIMP4Q99727 224 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 ZNF416Q9BWM5 594 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 TINAGL1Q9GZM7 467 aaPredicted RBP9.05□□□□□ -0.96
MCF2-209ENST00000520602 MFFQ9GZY8 342 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 R4GN57 208 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 LMX1BO60663 402 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 PATE4P0C8F1 98 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 LIMK1P53667 647 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 ZNF813Q6ZN06 617 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 LRRC20Q8TCA0 184 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 LIPHQ8WWY8 451 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 POFUT1Q9H488 388 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 ZCCHC4Q9H5U6 513 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 PRUNE2Q8WUY3 3088 aa9.05□□□□□ -0.96
MCF2-209ENST00000520602 A0A0B4J293 547 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 H7C417 338 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 M0R135 149 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 SGCEO43556 437 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 B4GALT1P15291 398 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 FKBP2P26885 142 aaKnown RBP9.04□□□□□ -0.96
MCF2-209ENST00000520602 GRB2P62993 217 aaKnown RBP9.04□□□□□ -0.96
MCF2-209ENST00000520602 C19orf57Q0VDD7 668 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 SCRN3Q0VDG4 424 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 OR52W1Q6IF63 320 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 UNQ9370/PRO34162Q6UXP9 181 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 C17orf107Q6ZR85 190 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 CATSPERDQ86XM0 798 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 STEAP2Q8NFT2 490 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 ZNF799Q96GE5 643 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 CMTM3Q96MX0 182 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 BCL2L14Q9BZR8 327 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 MTFP1Q9UDX5 166 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 C14orf166Q9Y224 244 aaKnown RBP9.04□□□□□ -0.96
MCF2-209ENST00000520602 NOSIPQ9Y314 301 aaKnown RBP9.04□□□□□ -0.96
MCF2-209ENST00000520602 KIAA1549LQ6ZVL6 1849 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 CCSO14618 274 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 ZNF780AO75290 641 aaPredicted RBP9.04□□□□□ -0.96
MCF2-209ENST00000520602 WISP1O95388 367 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 SCGB1D2O95969 90 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 FAHP16930 419 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 TRA2AQ13595 282 aaKnown RBP eCLIP9.04□□□□□ -0.96
MCF2-209ENST00000520602 KLF9Q13886 244 aaPredicted RBP9.04□□□□□ -0.96
MCF2-209ENST00000520602 MEF2DQ14814 521 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 GRK1Q15835 563 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 ACER2Q5QJU3 275 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 ZNF519Q8TB69 540 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 TOMM40LQ969M1 308 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 MAP6Q96JE9 813 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 SCGB3A2Q96PL1 93 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 ZNF442Q9H7R0 627 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 CNTD2Q9H8S5 307 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 ZNF275Q9NSD4 429 aaPredicted RBP9.04□□□□□ -0.96
MCF2-209ENST00000520602 PLA2G3Q9NZ20 509 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 CACNA1GO43497 2377 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 OR5H15A6NDH6 313 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 F5H0A9 414 aaPredicted RBP9.04□□□□□ -0.96
MCF2-209ENST00000520602 TEX46H3BTG2 121 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 SLC9A3R2Q15599 337 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 FAM180AQ6UWF9 173 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 RHOUQ7L0Q8 258 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 TRILQ7L0X0 811 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 OR11H7Q8NGC8 314 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 AKR7LQ8NHP1 331 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 MAFIPQ8WZ33 124 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 GPR173Q9NS66 373 aa9.04□□□□□ -0.96
MCF2-209ENST00000520602 IGKV1D-43A0A0B4J1Z2 117 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 SCGNO76038 276 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 GAAP10253 952 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 NFYAP23511 347 aaPredicted RBP9.03□□□□□ -0.96
MCF2-209ENST00000520602 ARG2P78540 354 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 SMCO1Q147U7 214 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 OPCMLQ14982 345 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 SHBQ15464 509 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 DEGS2Q6QHC5 323 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 ALKAL2Q6UX46 152 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 CREB3L2Q70SY1 520 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms