RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 COX4I1P13073 169 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 S100A5P33763 92 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 PSMD8P48556 350 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 ZNF45Q02386 682 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 TGFBR3Q03167 851 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 MERTKQ12866 999 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 IL18Q14116 193 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 ZNF846Q147U1 533 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 PIGGQ5H8A4 983 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 CLEC2AQ6UVW9 174 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 C4orf22Q6V702 233 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 CPNE9Q8IYJ1 553 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 FAM71AQ8IYT1 594 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 DEFB107AQ8IZN7 70 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 PACRGLQ8N7B6 248 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 OR10G3Q8NGC4 313 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 OR2AP1Q8NGE2 309 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 SUN5Q8TC36 379 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 TOP1MTQ969P6 601 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 HSFY1Q96LI6 401 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 SORT1Q99523 831 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 P2RY13Q9BPV8 354 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 DHRS9Q9BPW9 319 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 DCUN1D5Q9BTE7 237 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 C20orf24Q9BUV8 137 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 TMEM59Q9BXS4 323 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 YTHDF1Q9BYJ9 559 aaKnown RBP5.42□□□□□ -1.54
LSM1-202ENST00000520286 C20orf85Q9H1P6 137 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 GEMIN7Q9H840 131 aaKnown RBP5.42□□□□□ -1.54
LSM1-202ENST00000520286 ZDHHC11Q9H8X9 412 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 NANOGQ9H9S0 305 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 CXorf21Q9HAI6 301 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 MGAMO43451 1857 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 ABCA7Q8IZY2 2146 aa5.42□□□□□ -1.54
LSM1-202ENST00000520286 DOCK3Q8IZD9 2030 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 GOLGA8QA0A0J9YX86 632 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 TRBV11-1A0A0K0K1C0 115 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 CLDN25C9JDP6 229 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 GOLGA8RI6L899 631 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 TNFSF11O14788 317 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 OR2J3O76001 311 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 PROSCO94903 275 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 CRYZL1O95825 349 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 C2P06681 752 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 SLC2A5P22732 501 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 ATP5C1P36542 298 aaKnown RBP5.41□□□□□ -1.54
LSM1-202ENST00000520286 NOVP48745 357 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 FBXW4P57775 412 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 MRPS22P82650 360 aaKnown RBP5.41□□□□□ -1.54
LSM1-202ENST00000520286 KYAT1Q16773 422 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 ZNF774Q6NX45 483 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 C1orf94Q6P1W5 598 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 TRIM40Q6P9F5 258 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 TMIGD1Q6UXZ0 262 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 EIF3MQ7L2H7 374 aaKnown RBP5.41□□□□□ -1.54
LSM1-202ENST00000520286 ASCL5Q7RTU5 278 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 TMEM179BQ7Z7N9 219 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 ZNF546Q86UE3 836 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 SLC51BQ86UW2 128 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 OFCC1Q8IZS5 231 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 OR51S1Q8NGJ8 323 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 TSEN15Q8WW01 171 aaKnown RBP5.41□□□□□ -1.54
LSM1-202ENST00000520286 RASSF5Q8WWW0 418 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 CCDC124Q96CT7 223 aaKnown RBP5.41□□□□□ -1.54
LSM1-202ENST00000520286 BTN2A3PQ96KV6 586 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 SERPINI1Q99574 410 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 ARHGDIGQ99819 225 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 NICN1Q9BSH3 213 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 C20orf27Q9GZN8 174 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 CRLF2Q9HC73 371 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 VANGL2Q9ULK5 521 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 MN1Q10571 1320 aaPredicted RBP5.41□□□□□ -1.54
LSM1-202ENST00000520286 PLXNB2O15031 1838 aa5.41□□□□□ -1.54
LSM1-202ENST00000520286 NCOR1O75376 2440 aa5.4□□□□□ -1.54
LSM1-202ENST00000520286 IGLV3-22A0A075B6J6 115 aa5.4□□□□□ -1.54
LSM1-202ENST00000520286 CCL21O00585 134 aa5.4□□□□□ -1.54
LSM1-202ENST00000520286 COPEO14579 308 aa5.4□□□□□ -1.54
LSM1-202ENST00000520286 PHOX2AO14813 284 aa5.4□□□□□ -1.54
LSM1-202ENST00000520286 ZNF780AO75290 641 aaPredicted RBP5.4□□□□□ -1.54
LSM1-202ENST00000520286 MYO1DO94832 1006 aa5.4□□□□□ -1.54
LSM1-202ENST00000520286 KRT75O95678 551 aa5.4□□□□□ -1.54
LSM1-202ENST00000520286 PRKACBP22694 351 aa5.4□□□□□ -1.54
LSM1-202ENST00000520286 PRDX3P30048 256 aaKnown RBP5.4□□□□□ -1.54
LSM1-202ENST00000520286 OTX1P32242 354 aaPredicted RBP5.4□□□□□ -1.54
LSM1-202ENST00000520286 NUDT1P36639 197 aa5.4□□□□□ -1.54
LSM1-202ENST00000520286 GLP1RP43220 463 aa5.4□□□□□ -1.54
LSM1-202ENST00000520286 ARRB1P49407 418 aaPredicted RBP5.4□□□□□ -1.54
LSM1-202ENST00000520286 ERVK-25P63136 954 aa5.4□□□□□ -1.54
LSM1-202ENST00000520286 DYNLL1P63167 89 aaKnown RBP5.4□□□□□ -1.54
LSM1-202ENST00000520286 ZNF763Q0D2J5 394 aa5.4□□□□□ -1.54
LSM1-202ENST00000520286 PMS2P3Q13401 168 aa5.4□□□□□ -1.54
LSM1-202ENST00000520286 FLOT2Q14254 428 aa5.4□□□□□ -1.54
LSM1-202ENST00000520286 CHRNA6Q15825 494 aa5.4□□□□□ -1.54
LSM1-202ENST00000520286 MRPL23Q16540 153 aaKnown RBP5.4□□□□□ -1.54
LSM1-202ENST00000520286 CCDC58Q4VC31 144 aa5.4□□□□□ -1.54
LSM1-202ENST00000520286 PPM1LQ5SGD2 360 aa5.4□□□□□ -1.54
LSM1-202ENST00000520286 C1orf100Q5SVJ3 147 aa5.4□□□□□ -1.54
LSM1-202ENST00000520286 PDPK2PQ6A1A2 396 aa5.4□□□□□ -1.54
LSM1-202ENST00000520286 TWF2Q6IBS0 349 aaKnown RBP5.4□□□□□ -1.54
LSM1-202ENST00000520286 TIFABQ6ZNK6 161 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms