RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 PIGXQ8TBF5 258 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 FCAMRQ8WWV6 532 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 RASSF5Q8WWW0 418 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 PROX1Q92786 737 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 TAMM41Q96BW9 452 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 CCT8L2Q96SF2 557 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 ARHGDIGQ99819 225 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 PSD2Q9BQI7 771 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 WFDC6Q9BQY6 131 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 NAA11Q9BSU3 229 aaPredicted RBP5.93□□□□□ -1.46
SDCBP-208ENST00000520228 TAPBPLQ9BX59 468 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 C12orf10Q9HB07 376 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 MCCC2Q9HCC0 563 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 FANCFQ9NPI8 374 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 ZNF701Q9NV72 531 aaPredicted RBP5.93□□□□□ -1.46
SDCBP-208ENST00000520228 CMTM6Q9NX76 183 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 EMC3Q9P0I2 261 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 CRYBG3Q68DQ2 2970 aa5.93□□□□□ -1.46
SDCBP-208ENST00000520228 ANKHD1Q8IWZ3 2542 aaKnown RBP5.92□□□□□ -1.46
SDCBP-208ENST00000520228 IGKV3D-15A0A087WSY6 115 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 FAM220BPB1ANY3 271 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 E9PI62 339 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 CASKO14936 926 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 SPRY1O43609 319 aaPredicted RBP5.92□□□□□ -1.46
SDCBP-208ENST00000520228 TPST2O60704 377 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 RAMP1O60894 148 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 NPIPB7O75200 414 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 AKR7A3O95154 331 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 AHSA1O95433 338 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 FAM107AO95990 144 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 IGHV4-38-2P0DP08 117 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 EPHA2P29317 976 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 KDELR2P33947 212 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 UGT2B10P36537 528 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 CAPZA2P47755 286 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 SLC7A2P52569 658 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 CRYBA2P53672 197 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 PSME3P61289 254 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 NRF1Q16656 503 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 OTUD3Q5T2D3 398 aaPredicted RBP5.92□□□□□ -1.46
SDCBP-208ENST00000520228 FAM91A1Q658Y4 838 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 TMEM225Q6GV28 225 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 ZNF613Q6PF04 617 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 PAQR6Q6TCH4 344 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 C6orf89Q6UWU4 347 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 TFAP2EQ6VUC0 442 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 USP43Q70EL4 1123 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 ZNF100Q8IYN0 542 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 MICU2Q8IYU8 434 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 OR6T1Q8NGN1 323 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 VANGL1Q8TAA9 524 aaPredicted RBP5.92□□□□□ -1.46
SDCBP-208ENST00000520228 SLC38A4Q969I6 547 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 WFIKKN1Q96NZ8 548 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 ZNF300Q96RE9 604 aaPredicted RBP5.92□□□□□ -1.46
SDCBP-208ENST00000520228 EPYCQ99645 322 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 MCHR1Q99705 422 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 MED18Q9BUE0 208 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 ADPRHL2Q9NX46 363 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 SLC9A8Q9Y2E8 581 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 SH3GLB1Q9Y371 365 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 TACC2O95359 2948 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 NUP214P35658 2090 aaPredicted RBP5.92□□□□□ -1.46
SDCBP-208ENST00000520228 LRBAP50851 2863 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 GTF3C1Q12789 2109 aa5.92□□□□□ -1.46
SDCBP-208ENST00000520228 NCKAP5O14513 1909 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 EML6Q6ZMW3 1958 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 EXPH5Q8NEV8 1989 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 APCP25054 2843 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 IGKV1D-42A0A075B6H8 117 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 TRAV36DV7A0A075B6V5 113 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 A0A087WUJ7 227 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 A0A0B4J2E0 115 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 A0A1B0GX12 115 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 TRAPPC13A5PLN9 417 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 CPSF4LA6NMK7 179 aaKnown RBP5.91□□□□□ -1.46
SDCBP-208ENST00000520228 ZNF716A6NP11 495 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 CXCR6O00574 342 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 NME4O00746 187 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 OR2T1O43869 369 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 MRPL33O75394 65 aaKnown RBP5.91□□□□□ -1.46
SDCBP-208ENST00000520228 CTAG2O75638 210 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 GTF2E2P29084 291 aaKnown RBP5.91□□□□□ -1.46
SDCBP-208ENST00000520228 RPS5P46782 204 aaKnown RBP5.91□□□□□ -1.46
SDCBP-208ENST00000520228 OR3A2P47893 321 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 GSK3BP49841 420 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 MNAT1P51948 309 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 SLC17A1Q14916 467 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 P2RY6Q15077 328 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 NPTX1Q15818 432 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 LRRC23Q53EV4 343 aaPredicted RBP5.91□□□□□ -1.46
SDCBP-208ENST00000520228 CYBRD1Q53TN4 286 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 C5orf46Q6UWT4 87 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 STAC2Q6ZMT1 411 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 Q6ZT83 130 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 CARM1Q86X55 608 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 RBM45Q8IUH3 476 aaKnown RBP5.91□□□□□ -1.46
SDCBP-208ENST00000520228 UBE2J2Q8N2K1 259 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 C10orf53Q8N6V4 93 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 TMEM99Q8N816 258 aa5.91□□□□□ -1.46
SDCBP-208ENST00000520228 OR4D11Q8NGI4 311 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms