RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 NOS3P29474 1203 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 RRM2P31350 389 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 IFNGR2P38484 337 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 TRAP1Q12931 704 aaKnown RBP10.4□□□□□ -0.74
CSMD1-205ENST00000519623 ZNF404Q494X3 552 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 SAMD4BQ5PRF9 694 aaKnown RBP10.4□□□□□ -0.74
CSMD1-205ENST00000519623 SLC35F1Q5T1Q4 408 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 PGBD2Q6P3X8 592 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 RBMS3Q6XE24 437 aaKnown RBP10.4□□□□□ -0.74
CSMD1-205ENST00000519623 ZNF620Q6ZNG0 422 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 PGAM4Q8N0Y7 254 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 SDR9C7Q8NEX9 313 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 OR52E2Q8NGJ4 325 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 OR10S1Q8NGN2 331 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 OR2AJ1Q8NGZ0 328 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 ZNRF4Q8WWF5 429 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 RAB40AQ8WXH6 277 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 SLCO4A1Q96BD0 722 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 ZMYND19Q96E35 227 aaPredicted RBP10.4□□□□□ -0.74
CSMD1-205ENST00000519623 MAP6Q96JE9 813 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 NSMCE2Q96MF7 247 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 ATF6BQ99941 703 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 MRI1Q9BV20 369 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 CDADC1Q9BWV3 514 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 SSBP3Q9BWW4 388 aaPredicted RBP10.4□□□□□ -0.74
CSMD1-205ENST00000519623 FAM107BQ9H098 131 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 ARL8BQ9NVJ2 186 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 OR5V1Q9UGF6 321 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 TMCC3Q9ULS5 477 aa10.4□□□□□ -0.74
CSMD1-205ENST00000519623 SOX21Q9Y651 276 aaPredicted RBP10.4□□□□□ -0.74
CSMD1-205ENST00000519623 IGHV2-70DA0A0C4DH43 119 aa10.39□□□□□ -0.75
CSMD1-205ENST00000519623 KIR2DS1A0A191URI9 304 aa10.39□□□□□ -0.75
CSMD1-205ENST00000519623 LRRC30A6NM36 301 aa10.39□□□□□ -0.75
CSMD1-205ENST00000519623 BHLHE40O14503 412 aa10.39□□□□□ -0.75
CSMD1-205ENST00000519623 ATP8B1O43520 1251 aa10.39□□□□□ -0.75
CSMD1-205ENST00000519623 KRT36O76013 467 aa10.39□□□□□ -0.75
CSMD1-205ENST00000519623 HLA-DQA2P01906 255 aa10.39□□□□□ -0.75
CSMD1-205ENST00000519623 IGHV4-38-2P0DP08 117 aa10.39□□□□□ -0.75
CSMD1-205ENST00000519623 RPS2P15880 293 aaKnown RBP10.39□□□□□ -0.75
CSMD1-205ENST00000519623 ANOS1P23352 680 aa10.39□□□□□ -0.75
CSMD1-205ENST00000519623 RAD23AP54725 363 aa10.39□□□□□ -0.75
CSMD1-205ENST00000519623 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.39□□□□□ -0.75
CSMD1-205ENST00000519623 LRRN1Q6UXK5 716 aa10.39□□□□□ -0.75
CSMD1-205ENST00000519623 ZNF841Q6ZN19 808 aa10.39□□□□□ -0.75
CSMD1-205ENST00000519623 ZDHHC21Q8IVQ6 265 aa10.39□□□□□ -0.75
CSMD1-205ENST00000519623 CELF2-AS1Q8N7Q2 184 aa10.39□□□□□ -0.75
CSMD1-205ENST00000519623 SGMS2Q8NHU3 365 aa10.39□□□□□ -0.75
CSMD1-205ENST00000519623 Q8TCH9 128 aa10.39□□□□□ -0.75
CSMD1-205ENST00000519623 NEIL1Q96FI4 390 aaPredicted RBP10.39□□□□□ -0.75
CSMD1-205ENST00000519623 DUX5Q96PT3 197 aa10.39□□□□□ -0.75
CSMD1-205ENST00000519623 EGLN3Q9H6Z9 239 aa10.39□□□□□ -0.75
CSMD1-205ENST00000519623 IL20Q9NYY1 176 aa10.39□□□□□ -0.75
CSMD1-205ENST00000519623 KCNG2Q9UJ96 466 aa10.39□□□□□ -0.75
CSMD1-205ENST00000519623 C5orf63A6NC05 138 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 DNAJC9-AS1A6NH13 148 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 SPRY1O43609 319 aaPredicted RBP10.38□□□□□ -0.75
CSMD1-205ENST00000519623 GASTP01350 101 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 PSKH1P11801 424 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 OTX1P32242 354 aaPredicted RBP10.38□□□□□ -0.75
CSMD1-205ENST00000519623 PYCR1P32322 319 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 CD200P41217 278 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 RPS27P42677 84 aaKnown RBP10.38□□□□□ -0.75
CSMD1-205ENST00000519623 TPTEP56180 551 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 GNB2P62879 340 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 FOXL1Q12952 345 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 MALLQ13021 153 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 BAMBIQ13145 260 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 MPPED2Q15777 294 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 SPATS1Q496A3 300 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 CLEC12AQ5QGZ9 265 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 ZNF770Q6IQ21 691 aaPredicted RBP10.38□□□□□ -0.75
CSMD1-205ENST00000519623 LYPD2Q6UXB3 125 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 C9orf139Q6ZV77 190 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 PGAP1Q75T13 922 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 PIGWQ7Z7B1 504 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 CPLX4Q7Z7G2 160 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 C1orf87Q8N0U7 546 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 CYB561A3Q8NBI2 242 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 ERGIC1Q969X5 290 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 UPRTQ96BW1 309 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 BTBD10Q9BSF8 475 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 ZNF747Q9BV97 191 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 NSRP1Q9H0G5 558 aaKnown RBP10.38□□□□□ -0.75
CSMD1-205ENST00000519623 TAGLN3Q9UI15 199 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 PCDHGB1Q9Y5G3 927 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 LYVE1Q9Y5Y7 322 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 CDH10Q9Y6N8 788 aa10.38□□□□□ -0.75
CSMD1-205ENST00000519623 IGHV3OR16-10A0A075B7F0 116 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 TVP23AA6NH52 213 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 CD300LBA8K4G0 201 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 CLDN34H7C241 214 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 M0R135 149 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 TNFRSF13BO14836 293 aaPredicted RBP10.37□□□□□ -0.75
CSMD1-205ENST00000519623 FAM20BO75063 409 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 PTBP3O95758 552 aaKnown RBP10.37□□□□□ -0.75
CSMD1-205ENST00000519623 PLATP00750 562 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 ZNF823P16415 610 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 CA6P23280 308 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 PSMB10P40306 273 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 PITPNBP48739 271 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms