RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 CIB3Q96Q77 187 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR7D2Q96RA2 312 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 FAAP24Q9BTP7 215 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 MRIQ9BWK5 157 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 EIF5A2Q9GZV4 153 aaKnown RBP4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 PORCNQ9H237 461 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 TCEAL2Q9H3H9 227 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 NELFAQ9H3P2 528 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 MEPEQ9NQ76 525 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 TRIM36Q9NQ86 728 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 CENPMQ9NSP4 180 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 CBLN4Q9NTU7 201 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 SIDT1Q9NXL6 827 aaKnown RBP4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 SLC2A8Q9NY64 477 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 MRPL27Q9P0M9 148 aaKnown RBP4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 IL20RAQ9UHF4 553 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 FOXJ3Q9UPW0 622 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 RCE1Q9Y256 329 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 RASD1Q9Y272 281 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 AMDHD2Q9Y303 409 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 HDGFL3Q9Y3E1 203 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF337Q9Y3M9 751 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 B3GALT1Q9Y5Z6 326 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 ETV7Q9Y603 341 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 ARL5AQ9Y689 179 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 COX11Q9Y6N1 276 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 ANKRD12Q6UB98 2062 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 FOCADQ5VW36 1801 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 NUP188Q5SRE5 1749 aa4.32□□□□□ -1.72
HMGB1P19-201ENST00000517578 EVPLQ92817 2033 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 DSPPQ9NZW4 1301 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 A0A0B4J2A0 478 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 IGHV2OR16-5A0A0B4J2B6 119 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 A0A1B0GTI1 187 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 A0A1W2PNV4 684 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 A0A1W2PR48 441 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 YJEFN3A6XGL0 299 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF814B7Z6K7 855 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 J3QR89 54 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 LEFTY2O00292 366 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 DCTN6O00399 190 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 MANBAO00462 879 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 PRRG1O14668 218 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 LDB2O43679 373 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 KLK8O60259 260 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR7C2O60412 319 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 NME6O75414 186 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 ERAL1O75616 437 aaKnown RBP4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 PSMD10O75832 226 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR6A2O95222 327 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 KCNK5O95279 499 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 IGSF6O95976 241 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 AMBPP02760 352 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 GAPDHP04406 335 aaKnown RBP4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 PCCBP05166 539 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 HLA-DQB2P05538 268 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 CD1AP06126 327 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 CTSLP07711 333 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 MMP7P09237 267 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 HOXC6P09630 235 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR5G3P0C626 314 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 AKAIN1P0CW23 69 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 SMIM17P0DL12 118 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 SNHG28P0DPA3 235 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 CCL2P13500 99 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 CELP19835 753 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 CR2P20023 1033 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 S100GP29377 79 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 CMPK1P30085 196 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 SLC6A8P48029 635 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 CYB561P49447 251 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 THBS3P49746 956 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF41P51814 821 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 RRADP55042 308 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 ERVS71-1P61550 626 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 RPS23P62266 143 aaKnown RBP4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 RPL23AP62750 156 aaKnown RBP4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 CCL7P80098 99 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 SSBP2P81877 361 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 DGCR2P98153 550 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 PAX2Q02962 417 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 SIGLEC14Q08ET2 396 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 CBFBQ13951 182 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 GPR18Q14330 331 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 ODF1Q14990 250 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 PAFAH1B3Q15102 231 aaKnown RBP4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 ELOBQ15370 118 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 ADIPOQQ15848 244 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 TMEM176BQ3YBM2 270 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 FAM174BQ3ZCQ3 159 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 SLC22A6Q4U2R8 563 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 TMEM41BQ5BJD5 291 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 HECTD2Q5U5R9 776 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 AGBL4Q5VU57 503 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 C18orf63Q68DL7 685 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 USP17L6PQ6QN14 398 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 CLEC20AQ6ZU45 233 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 FCRLAQ7L513 359 aa4.31□□□□□ -1.72
HMGB1P19-201ENST00000517578 OTOP2Q7RTS6 562 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms