RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 DCLRE1CQ96SD1 692 aaKnown RBP8.5□□□□□ -1.05
CLN8-202ENST00000517514 DOK1Q99704 481 aa8.5□□□□□ -1.05
CLN8-202ENST00000517514 SOX7Q9BT81 388 aa8.5□□□□□ -1.05
CLN8-202ENST00000517514 CDCA4Q9BXL8 241 aa8.5□□□□□ -1.05
CLN8-202ENST00000517514 SLC24A3Q9HC58 644 aa8.5□□□□□ -1.05
CLN8-202ENST00000517514 INPP5EQ9NRR6 644 aa8.5□□□□□ -1.05
CLN8-202ENST00000517514 TBCCD1Q9NVR7 557 aa8.5□□□□□ -1.05
CLN8-202ENST00000517514 IKZF2Q9UKS7 526 aa8.5□□□□□ -1.05
CLN8-202ENST00000517514 LRCH1Q9Y2L9 728 aa8.5□□□□□ -1.05
CLN8-202ENST00000517514 LSM2Q9Y333 95 aaKnown RBP8.5□□□□□ -1.05
CLN8-202ENST00000517514 EXOSC1Q9Y3B2 195 aaKnown RBP8.5□□□□□ -1.05
CLN8-202ENST00000517514 DSCAMO60469 2012 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 CHD3Q12873 2000 aaKnown RBP8.49□□□□□ -1.05
CLN8-202ENST00000517514 IRGMA1A4Y4 181 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 J3QLW9 94 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 GOSR1O95249 250 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 CLPTM1O96005 669 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 ZNF19P17023 458 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 GLRXP35754 106 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 MPV17P39210 176 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 MAP2K4P45985 399 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 MMP16P51512 607 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 GTF2A1P52655 376 aaPredicted RBP8.49□□□□□ -1.05
CLN8-202ENST00000517514 RIDAP52758 137 aaKnown RBP8.49□□□□□ -1.05
CLN8-202ENST00000517514 TPTEP56180 551 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 PRSS12P56730 875 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 GABARAPL2P60520 117 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 PPP1CBP62140 327 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 TLE4Q04727 773 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 TNK1Q13470 666 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 TAF13Q15543 124 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 ADIPOQQ15848 244 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 ALKBH6Q3KRA9 238 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 GLYATL3Q5SZD4 288 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 SPATA46Q5T0L3 261 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 FDX2Q6P4F2 183 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 SLC22A25Q6T423 547 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 CATSPERDQ86XM0 798 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 STX19Q8N4C7 294 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 ZNF283Q8N7M2 679 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 YIPF7Q8N8F6 280 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 OR8B12Q8NGG6 310 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 OR52N1Q8NH53 320 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 ABHD4Q8TB40 342 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 SLC25A40Q8TBP6 338 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 RPS4Y2Q8TD47 263 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 IPCEF1Q8WWN9 437 aaPredicted RBP8.49□□□□□ -1.05
CLN8-202ENST00000517514 AKAP1Q92667 903 aaKnown RBP eCLIP8.49□□□□□ -1.05
CLN8-202ENST00000517514 SPTSSAQ969W0 71 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 SGK3Q96BR1 496 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 RADILQ96JH8 1075 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 OR5M11Q96RB7 305 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 MROQ9BYG7 248 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 YTHDF1Q9BYJ9 559 aaKnown RBP8.49□□□□□ -1.05
CLN8-202ENST00000517514 OR2J1Q9GZK6 312 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 LIME1Q9H400 295 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 BRD7Q9NPI1 651 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 CA10Q9NS85 328 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 SCN3BQ9NY72 215 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 MYEF2Q9P2K5 600 aaKnown RBP8.49□□□□□ -1.05
CLN8-202ENST00000517514 ST6GALNAC2Q9UJ37 374 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 GNG8Q9UK08 70 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 FZR1Q9UM11 496 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 SLC22A13Q9Y226 551 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 CAB39Q9Y376 341 aaPredicted RBP8.49□□□□□ -1.05
CLN8-202ENST00000517514 TPRKBQ9Y3C4 175 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 ATP23Q9Y6H3 246 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 R4GMQ9 66 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 ABCA12Q86UK0 2595 aa8.49□□□□□ -1.05
CLN8-202ENST00000517514 A0A1B0GTI1 187 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 TMEM269A0A1B0GVZ9 245 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 HS3ST1O14792 307 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 RGS10O43665 173 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 LILRA1O75019 489 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 RPP14O95059 124 aaKnown RBP8.48□□□□□ -1.05
CLN8-202ENST00000517514 CD8AP01732 235 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 TTRP02766 147 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 LCATP04180 440 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 KRT8P05787 483 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 DANCRP0C864 163 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 ZNF250P15622 560 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 PCMT1P22061 227 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 HSD11B1P28845 292 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 HLXQ14774 488 aaPredicted RBP8.48□□□□□ -1.05
CLN8-202ENST00000517514 KCTD21Q4G0X4 260 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 WDR38Q5JTN6 314 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 VHLLQ6RSH7 139 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 Q6ZSR3 168 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 FAM57BQ71RH2 274 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 PRSS48Q7RTY5 328 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 KCTD20Q7Z5Y7 419 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.48□□□□□ -1.05
CLN8-202ENST00000517514 SPARTQ8N0X7 666 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 OR1J1Q8NGS3 322 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 OR2G2Q8NGZ5 317 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 OR2AE1Q8NHA4 323 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 SNX33Q8WV41 574 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 GATAD2BQ8WXI9 593 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 NRGNQ92686 78 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 MYDGFQ969H8 173 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms