RNA–Protein interactions for RNA: ENST00000517083.1

RNU6-548P-201, Transcript of RNA, U6 small nuclear 548, pseudogene, humanhuman

BASIC

Gene RNU6-548P, Length 115 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-548P-201ENST00000517083 ACTL9Q8TC94 416 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 Q8TCH9 128 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 DNAJA4Q8WW22 397 aaPredicted RBP1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 ACOT11Q8WXI4 607 aaPredicted RBP1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 SLC7A6Q92536 515 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 ATP6V1E2Q96A05 226 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 ESAMQ96AP7 390 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 CIDECQ96AQ7 238 aaPredicted RBP1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 SLC25A36Q96CQ1 311 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 MED30Q96HR3 178 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 HSH2DQ96JZ2 352 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 HRASLS5Q96KN8 279 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 LRR1Q96L50 414 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 ZNF681Q96N22 645 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 OXGR1Q96P68 337 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 FYTTD1Q96QD9 318 aaKnown RBP1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 RAB3IPQ96QF0 476 aaPredicted RBP1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 OR2M2Q96R28 347 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 ECSITQ9BQ95 431 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 TMEM70Q9BUB7 260 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 MECRQ9BV79 373 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 BTBD2Q9BX70 525 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 MRPL1Q9BYD6 325 aaKnown RBP1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 PARD6BQ9BYG5 372 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 WFDC10AQ9H1F0 79 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 ISCUQ9H1K1 167 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 C11orf68Q9H3H3 251 aaKnown RBP1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 HAUS4Q9H6D7 363 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 FNDC4Q9H6D8 234 aaPredicted RBP1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 ZFAND3Q9H8U3 227 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 GNB4Q9HAV0 340 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 SLC25A19Q9HC21 320 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 LZTFL1Q9NQ48 299 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 C20orf96Q9NUD7 363 aaPredicted RBP1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 TAB2Q9NYJ8 693 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 USE1Q9NZ43 259 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 ZNF224Q9NZL3 707 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 CD274Q9NZQ7 290 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 OPTCQ9UBM4 332 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 SLC23A1Q9UHI7 598 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 A4GNTQ9UNA3 340 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 MINOS1-NBL1R4GNA1 71 aa1.41□□□□□ -2.18
RNU6-548P-201ENST00000517083 IGHV4OR15-8A0A075B7B6 117 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 hCG_1818297A0A087WSY0 165 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 A0A087WW49 117 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 TMEM72A0PK05 275 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 ZC3H12DA2A288 527 aaKnown RBP1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 TMEM247A6NEH6 219 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 NCBP2LA6PVI3 153 aaKnown RBP1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 FAM90A22PA8MWA6 464 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 F8W735 103 aaPredicted RBP1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 I3L521 148 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 PSMD9O00233 223 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 AIM2O14862 343 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 DEFB4AO15263 64 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 EIF3HO15372 352 aaKnown RBP eCLIP1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 FGF16O43320 207 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 PSTPIP1O43586 416 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 AKR1B10O60218 316 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 UGDHO60701 494 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 SERPINI2O75830 405 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 HAUS5O94927 633 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 PTBP3O95758 552 aaKnown RBP1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 C6orf47O95873 294 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 IFNB1P01574 187 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 IGHG1P01857 330 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 IGHG2P01859 326 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 IGHG4P01861 327 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 CD74P04233 296 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 HSPB1P04792 205 aaKnown RBP1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 NEFLP07196 543 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 GRPP07492 148 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 IL3P08700 152 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 H2AFZP0C0S5 128 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 CCDC175P0C221 793 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 ETFAP13804 333 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 RAC2P15153 192 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 MUC1P15941 1255 aaPredicted RBP1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 IGFBP3P17936 291 aaPredicted RBP1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 ZP3P21754 424 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 ANOS1P23352 680 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 NPY1RP25929 384 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 HLA-DMBP28068 263 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 HTR1DP28221 377 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 CD40LGP29965 261 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 CEACAM3P40198 252 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 RPS5P46782 204 aaKnown RBP1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 GABRA2P47869 451 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 TGM4P49221 684 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 SLC12A2P55011 1212 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 KRTAP10-4P60372 401 aaPredicted RBP1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 CTXN1P60606 82 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 COPZ1P61923 177 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 HSPB3Q12988 150 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 TP53BP2Q13625 1128 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 IQCB1Q15051 598 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 OR8G1Q15617 311 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 GPR68Q15743 365 aa1.4□□□□□ -2.19
RNU6-548P-201ENST00000517083 ANKRD55Q3KP44 614 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms