RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 NUDT9Q9BW91 350 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 MYOZ1Q9NP98 299 aaPredicted RBP0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 ZNF302Q9NR11 478 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 SLC17A7Q9P2U7 560 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 MTFP1Q9UDX5 166 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 LSM7Q9UK45 103 aaKnown RBP0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 SMIM26A0A096LP01 95 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 CLRN2A0PK11 232 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 A8MWL6 223 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 CENPBD1B2RD01 187 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 K7EPI3 171 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 KLHL41O60662 606 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 NOL3O60936 208 aaKnown RBP0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 LCA5LO95447 670 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 MT-ND4P03905 459 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 SERPIND1P05546 499 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 KITLGP21583 273 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 FOXN2P32314 431 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 CEBPDP49716 269 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 CCNHP51946 323 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 PRR3P79522 188 aaKnown RBP0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 DGCR6Q14129 220 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 NCF4Q15080 339 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 SLC9A3R2Q15599 337 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 ZNF181Q2M3W8 571 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 ZNF660Q6AZW8 331 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 ZNF470Q6ECI4 717 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 CBR4Q8N4T8 237 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 MS4A15Q8N5U1 240 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 CCDC126Q96EE4 140 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 C16orf45Q96MC5 204 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 SAMD10Q9BYL1 202 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 DSN1Q9H410 356 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 TAS2R5Q9NYW4 299 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 VWDEQ8N2E2 1590 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 AHNAK2Q8IVF2 5795 aa0.73□□□□□ -2.29
RNU6-1088P-201ENST00000516850 SPATA31E1Q6ZUB1 1445 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 SSH2Q76I76 1423 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 DOCK6Q96HP0 2047 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 BTBD17A6NE02 478 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 CLDN34H7C241 214 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 ZNF73O43830 326 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 SMPD2O60906 423 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 CLPXO76031 633 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 THRAP10827 490 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 ETS2P15036 469 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 PRKACBP22694 351 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 ACAA2P42765 397 aaKnown RBP0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 CMC4P56277 68 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 CCDC152Q4G0S7 254 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 PCOTHQ58A44 107 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 ATAD3BQ5T9A4 648 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 UBE2UQ5VVX9 321 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 KRTAP5-10Q6L8G5 202 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 FAM131AQ6UXB0 335 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 C11orf72Q8NBR9 251 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 SDR9C7Q8NEX9 313 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 OR5B3Q8NH48 314 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 OR1L1Q8NH94 360 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 GPR151Q8TDV0 419 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 TMEM243Q9BU79 118 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 RWDD2AQ9UIY3 292 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 LAMB2P55268 1798 aa0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 RPRD2Q5VT52 1461 aaKnown RBP0.72□□□□□ -2.29
RNU6-1088P-201ENST00000516850 C15orf38-AP3S2A0A0A6YYH1 394 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 LYRM9A8MSI8 78 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 SYCE1LA8MT33 242 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 PLPP1O14494 284 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 FKBP6O75344 327 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 SERPINB7O75635 380 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 CPSF4O95639 269 aaKnown RBP0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 SERPINA5P05154 406 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 CTSGP08311 255 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 MPIP34949 423 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 ZNF83P51522 516 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 TAS2R46P59540 309 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 STXBP1P61764 594 aaKnown RBP0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 IL5RAQ01344 420 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 C2orf54Q08AI8 447 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 GK3PQ14409 553 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 C6orf226Q5I0X4 101 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 KDELC1Q6UW63 502 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 LRRC75A-AS1Q8N1F1 130 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 RAB3IL1Q8TBN0 382 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 EEF1AKMT3Q96AZ1 226 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 OTUB2Q96DC9 234 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 HPF1Q9NWY4 346 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 LRRC42Q9Y546 428 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 HELZ2Q9BYK8 2649 aaKnown RBP0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 CACNA1GO43497 2377 aa0.71□□□□□ -2.3
RNU6-1088P-201ENST00000516850 MYO9BQ13459 2157 aa0.7□□□□□ -2.3
RNU6-1088P-201ENST00000516850 PLXNA3P51805 1871 aa0.7□□□□□ -2.3
RNU6-1088P-201ENST00000516850 PDZK1P1A8MUH7 402 aa0.7□□□□□ -2.3
RNU6-1088P-201ENST00000516850 GMFGO60234 142 aa0.7□□□□□ -2.3
RNU6-1088P-201ENST00000516850 MAS1P04201 325 aa0.7□□□□□ -2.3
RNU6-1088P-201ENST00000516850 TROVE2P10155 538 aaKnown RBP eCLIP0.7□□□□□ -2.3
RNU6-1088P-201ENST00000516850 MCF2P10911 925 aa0.7□□□□□ -2.3
RNU6-1088P-201ENST00000516850 IL32P24001 234 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms