RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 NKX3-1Q99801 234 aaPredicted RBP13.59□□□□□ -0.23
THUMPD3-210ENST00000515662 TMEM246Q9BRR3 403 aa13.59□□□□□ -0.23
THUMPD3-210ENST00000515662 TMEM38BQ9NVV0 291 aa13.59□□□□□ -0.23
THUMPD3-210ENST00000515662 FAM240BA0A1B0GVZ2 78 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 TMIGD3P0DMS9 266 aaPredicted RBP13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 CDK2P24941 298 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 POU3F4P49335 361 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 SRP9P49458 86 aaKnown RBP13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 C2orf76Q3KRA6 126 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 ELFN2Q5R3F8 820 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 TMEM69Q5SWH9 247 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 FAM57BQ71RH2 274 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 RNF170Q96K19 258 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 SLX1AQ9BQ83 275 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 IRF2BPLQ9H1B7 796 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 RNF121Q9H920 327 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 ACKR4Q9NPB9 350 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 CGGBP1Q9UFW8 167 aaPredicted RBP13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 LOC100289279A0A1B0GTE1 492 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 DCDC2BA2VCK2 349 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 HMX3A6NHT5 357 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 SULT1B1O43704 296 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 S100A1P23297 94 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 MNDAP41218 407 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 TNFSF10P50591 281 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 EFNB2P52799 333 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 SLC10A1Q14973 349 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 GLYATL3Q5SZD4 288 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 PLET1Q6UQ28 207 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 KRT74Q7RTS7 529 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 LYPD6Q86Y78 171 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 FAM109AQ8N4B1 249 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 DLL3Q9NYJ7 618 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 NLKQ9UBE8 527 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 CACNG2Q9Y698 323 aa13.58□□□□□ -0.24
THUMPD3-210ENST00000515662 SYNGR4O95473 234 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 CCL1P22362 96 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 HTR2CP28335 458 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 CCL11P51671 97 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 RSPO1Q2MKA7 263 aaPredicted RBP13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 MTFR2Q6P444 385 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 PLXDC2Q6UX71 529 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 ABHD12BQ7Z5M8 362 aaPredicted RBP13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 NKAIN3Q8N8D7 197 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 OR6M1Q8NGM8 313 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 SOX7Q9BT81 388 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 KCNK15Q9H427 330 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 AUNIPQ9H7T9 357 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 GPR35Q9HC97 309 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 GPR84Q9NQS5 396 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 LOC390937A0A1W2PQ73 354 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 ACTL6AO96019 429 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 CST2P09228 141 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 GNALP38405 381 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 TAS2R20P59543 309 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 CDK10Q15131 360 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 C1orf100Q5SVJ3 147 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 ZNF529Q6P280 563 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 ANKRD16Q6P6B7 361 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 ZNF813Q6ZN06 617 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 NAA40Q86UY6 237 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 COMMD2Q86X83 199 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 SIAH3Q8IW03 269 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 TOMM5Q8N4H5 51 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 ASCC1Q8N9N2 400 aaKnown RBP13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 TMEM178AQ8NBL3 297 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 FDCSPQ8NFU4 85 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 LILRB4Q8NHJ6 448 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 GCDHQ92947 438 aaPredicted RBP13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 PLEKHA1Q9HB21 404 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 NOSIPQ9Y314 301 aaKnown RBP13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 RHBDD3Q9Y3P4 386 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 CSAG2Q9Y5P2 127 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 LIPGQ9Y5X9 500 aa13.57□□□□□ -0.24
THUMPD3-210ENST00000515662 FAM172BPA6NC97 362 aa13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 E9PLN8 166 aa13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 SMLR1H3BR10 107 aa13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 GABARAPH6UMI1 98 aa13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 TPPPO94811 219 aa13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 ZNF24P17028 368 aa13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 SLC6A1P30531 599 aa13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 OTX1P32242 354 aaPredicted RBP13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 RAB25P57735 213 aa13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 CEACAM16Q2WEN9 425 aa13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 RNFT1Q5M7Z0 435 aa13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 JAGN1Q8N5M9 183 aa13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 OR1M1Q8NGA1 313 aa13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 OR5D14Q8NGL3 314 aa13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 PGAM5Q96HS1 289 aa13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 SLC17A5Q9NRA2 495 aa13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 PLEK2Q9NYT0 353 aa13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 MCTS1Q9ULC4 181 aaKnown RBP13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 TMEM272A0A1B0GTI8 110 aa13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 ANKRD34BA5PLL1 514 aa13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 C5orf63A6NC05 138 aa13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 F5H5K5 113 aa13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 XRCC3O43542 346 aa13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 ORC5O43913 435 aa13.56□□□□□ -0.24
THUMPD3-210ENST00000515662 CTAG2O75638 210 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms